Gene Rmet_4638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4638 
Symbol 
ID4041499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1268511 
End bp1269644 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID637980059 
Productputative glycosyl hydrolase 
Protein accessionYP_586769 
Protein GI94313560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0454186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA GGTTGCTTGT TGCAACTCGC AAGGGATTGT TTGTGTTGCA GGCCGACGGT 
AAAGGCGGCT GGACGCTCGG CGAGCCCCAC TTCATCGGTG AGCCCGTGAA CATGGTGCTG
GCTGACCGGC GAGACGGATC GCTGTATGCG GCGCTCAATC TCGGCCATTT CGGTGTGAAA
CTGCATCGCC GGCGCGCTGG CATGGACGAT TGGGAAGAAT GCGCGGTGCC TGTCTACCCG
CCACAGCCAG CCGACGAGCA AACCGCTGGC GGCGCGAATG ATGCAAGCGC GACTGCCCCC
AGCCCACCCT CTCCTCCGTG GTCGCTTCAG CAAATCTGGT CGCTCGAGAC AGGCGGCGGG
GACGAGCCGG GCGTCTTGTG GGCCGGCACG ATTCCCGGCG GGCTCTTCCG CTCCGACGAT
GGCGGCGACA CATGGGTACT CAACCGCGCG CTATGGGATC GTCCGGAGCG TCGCGGATGG
TTTGGAGGCG GCTACGATGC GCCGGGCATC CATTCCGTGA TGGTGGACCC GCGCGACAGC
CGGCACGTGA CGATCGGTGT GTCGTGCGGT GGCGTCTGGC AAACCAGCGA CGGAGGCGCG
ACCTGGCAAT TGACTGCCGA TGGCATGGAG GCCGACTACA TGCCACCGGA ACAGCGCGGC
GACGCCAACA CGCAGGACCC GCACCGCGTC GTGCAATGCG CGGCCAACCC GGACGTCCTG
TGGACACAGC ATCATTGCGC CATCTTCCGC TCGACCGACG GGGCGATGCA GTGGCACCGG
ATTGAAGCGC AGCCATCGAG CTTCGGCTTC GCGGTTGCCG TGCATCCGCA CGAGCCAGAC
ACCGCGTGGT TCGTGCCCGC CGTGAAGGAC CAGTGCCGGA TCCCGGTGGA TGGCCAGTTC
ATCGTCACGC GCACCCGCGA TGGCGGGCGC ACGTTCGAGC GTTTCTCGGC AGGTCTGCCG
TCCGCACCGG CCTATGACCT GGTGTATCGG CACGGCCTCG CGGTGGATGA CTCCGGCACG
CGCCTGGCGA TGGGATCGAC CACCGGCGCG CTTTGGGCGT CCGAGAACGG CGGCGAAAAC
TGGCATCTGA TTTCAGCCCA TTTGCCACCG ATTTATTGTG TTCGCTTTGG ATAG
 
Protein sequence
MSDRLLVATR KGLFVLQADG KGGWTLGEPH FIGEPVNMVL ADRRDGSLYA ALNLGHFGVK 
LHRRRAGMDD WEECAVPVYP PQPADEQTAG GANDASATAP SPPSPPWSLQ QIWSLETGGG
DEPGVLWAGT IPGGLFRSDD GGDTWVLNRA LWDRPERRGW FGGGYDAPGI HSVMVDPRDS
RHVTIGVSCG GVWQTSDGGA TWQLTADGME ADYMPPEQRG DANTQDPHRV VQCAANPDVL
WTQHHCAIFR STDGAMQWHR IEAQPSSFGF AVAVHPHEPD TAWFVPAVKD QCRIPVDGQF
IVTRTRDGGR TFERFSAGLP SAPAYDLVYR HGLAVDDSGT RLAMGSTTGA LWASENGGEN
WHLISAHLPP IYCVRFG