| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4627 |
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| Symbol | |
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| ID | 4041488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1256333 |
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| End bp | 1256983 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980048 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_586758 |
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| Protein GI | 94313549 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.527017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACCAG ACACCATCTC CGTCGTGATC GCGGATGATC ACCCGGCGAT TCAGCTAGCC
GTCAAATCCA CCCTTACCGA GATTCCGACC GTCCAGATTG CCGCGATGTG CGCGTCCGGC
GGAGAGCTTT TCGCGGCTGT GGAAGCACAT CGGCCCGATC TCATTGTTAC GGATTTCACA
ATGGGCCGTT CCGAAGGCAA CGATGATGGC CTTCGCCTGA TCCAGCGGCT GCGCCAGTCC
GGCCCCGACA CGCCGATCGT CGTCTTCACC ATGCTGACCA ACGGCGGCCT GCTCACGCGC
ATACAGGAAT CAGGCGTCGC GGGCATCGTG GGCAAGGACG AGGAGCCGGC CATCCTGAGG
CAGATCTGCA TGGATGCGGT TTCCGGAAAT GGGCTGCGCC TGTCGCCAGG TATCTCGGCG
AGGATGGCAA GTGCCGGCGC AATGGCCGGC GGCGGTATCA GCCCGCTCTC GCCCAAGGAA
ATCGAAGTGG TGCGGATGTT CGCCGCTGGC AGCCCACTGA CCGAAATTGC CGGATACCTC
CATCGCACGC TGGCCACGGT GGCAACGCAG AAGCGTTCGG CCATGCGCAA GCTGAACATC
ACCAGTAACG CCGACCTCGT CACGTACGCG CGCGACAACG GCCTGACATG A
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| Protein sequence | MPPDTISVVI ADDHPAIQLA VKSTLTEIPT VQIAAMCASG GELFAAVEAH RPDLIVTDFT
MGRSEGNDDG LRLIQRLRQS GPDTPIVVFT MLTNGGLLTR IQESGVAGIV GKDEEPAILR
QICMDAVSGN GLRLSPGISA RMASAGAMAG GGISPLSPKE IEVVRMFAAG SPLTEIAGYL
HRTLATVATQ KRSAMRKLNI TSNADLVTYA RDNGLT
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