Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4626 |
Symbol | |
ID | 4041487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1253385 |
End bp | 1256336 |
Gene Length | 2952 bp |
Protein Length | 983 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980047 |
Product | two-component regulatory system sensor kinase |
Protein accession | YP_586757 |
Protein GI | 94313548 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.185559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGG ACACCGTCGA GCCGAACCGG AACCCGGACG CAGACTCGAC CCGGCCTGCG CCGCCAGACC TCCGCGCCGT CAAACGCAAT CTCCAGCGGG AACGCCGCGT ATTCTCGATG GTGGTGCTGC TTCTGGGGCT GCTGGTCGTT GCCATTGCCT CGACAGCCGT GCTCGTGCGA TTCAATGGCT CGCTGCGCGC CCAGGAGCAA ATGACCCGCC TGTACGAGCA GGGCGTGGTC GATGCGGTAC TGGAGCGCCG GAGCACGCTG GCCGCGAGCA ACCTGATTCT GGAACTGCGT GCCAACGGCA CGCTTCCCGT TGCAACGGGA GGGCGAACCG GTCTCTGCGC GAAGGTGGAT GCGTCCGCAC CATCCGACGA CGTGCTGCAG CAAAGCTGCG ACCAGTCCGT CCGCGCATTG CTCGCCGCCA GCCAGCGGCC CTCGATCGAG ATGATCTCGA TCGGCAGCGG CGCTACGTAT CGCTATGAAG CCCCAGATGC ATCGGGCGCG GCATCGCAGA CGGTGTTGCC ACCGATGTCT CCGGGGGCCA TCACGCAAAC GGTCCTCACC AGCTTTCGTG ATCGCGATAT CGATGTCCTG CAGGCGGCCC GGGAAAAGCG TGTCGAATGG TTCGGGGTAC CCGGCAGTGC ACCGGGCGCC GATCCGGAGA TGGTTGGCGC ATCGCTGGTG GCGAAGGGTA GCCAGCTTTA CGCGATCGCG CTCACTCGTA TCCCGCTGCA CGTGCTGCTG CGCGATGCCG GGCCCAACCT TCCGATCCCG GAACCGATCG TGTTCGACGG CGTCGGTGCG CCGCTGGTGC CGGCCGCTGC CCGGACCAAC GCGCAACGGC TCGACGCCCG GCTGGAGTCG AAGGCGGACG GCATGTTCCA CTGGGTCCCC GGCTACGGCT GGGCGCTGCG CCGGCCGCCG CTCGTATCCG ACGTCGGCCA CCTGATCTTC GCGCTCCCGA TCGGGCATCA GCTTCAGGGC ATGGCCGACG AACTGATGGT GATTGGCGCG ATCGCCGGCG CGCTGCTCGC CTTGCTGTTT GCGATGTACC GCTACTGGAA CTATCGCTTC CTGACCGGCA CCTATGCCGA AGCAGCGCGT GCCCAGCGGC TGCTGCACCA AGCCCGCCTT GCCAGCGACG CTGCCGCCAG CGCCCGGGTG GCGTTCTTCG CATCGATGAG CCACGAGATA CGGACACCGC TTGCCTCGCT GCTGGGCAAC ATGGAACTCG TTGCCAGAGG CCCACTGCCG CCGGATCAAC GGACACGGGT CGGCGCCATG CAGGTATCGG CCGAAGGGTT GCTGCAGATC GTCAACGACG TGCTCGATTT TTCCCGAATC GACGTGGGCG AACTAAGCAT CGAGCCGCAA CCGATAGCCG TGACCGATTT GCTCTCGCGT ATCGCCGTCG CCCATGCGCC GCTGGCCGCC GGGCGCGGCT TGCGCTTCAT CACGGTGTAC GGCCGGGACA TCCCCGCGCG GCTCGACCTT GATCCCGTGC GGCTGACCCA GATCGTCAAC AACCTGCTTG GCAATGCGTT CAAGTTCACG CAGGCCGGCA AGGTAGTTCT GCGCGCGCGC TGGGCAGATG GGGCATTGGA AATCATCGTC GCCGATACCG GCATCGGCAT TCCGGACGAG TACAAGGACC GCCTGTTCCA GCCGTTCTCA CAGGTGGCTG ACAATCGGCT CGCCCAGGCC CGTGGAACCG GGCTCGGACT GTCCATCTGC TCGCGGCTTG CGGAACGGAT GGGCGGGCGT ATCTCGCTCG ACAGCATTCT GGGCGTGGGC ACGCGTGTGA CGGTTTGCGT GCCGCCACGC ATCGCCGACG CAGCGCCAAT GGCACGGCCG GGCCTGCCGC CGAGCCGCAC GCTGGTGCTG TCGCGCGAAC CCGAATGCCT GGAGGGAATG CTCAACCAGA TCGACTGGGG CACCTGCCAG CCATCGGCCA GGATGGATCT GGACCGCCCG GTCGACGCGG AGAGCTATGA CTGTCTGCTG GTCGCCGACG GCTTCGATCC GGATCGGGTG CTGGCCTGGT GGCCAAGGCC GGCTTCGATC GTCTGGCTGA AGCAGTTGGG CCCGGTGGTG GCCACGGTGC GACCCGATGG CGGGCGCGAG GTGTCCGCCT ACAGTCTTGT CGGTATCCAT GCGGCTGCGT GCGCGGTCAT CACTGGCCTC CACCCGGTCA CGTCTGACGA TGACGGGGGT ACGGGTCAAT TGCTGTCGCC ACTGGCTGGC CGTCTGTTGC TGATTGCCGA GGACAATTTG CTGAACCGCG ATCTACTGCG GGACCAGCTT CTCGCGCTCG GTGCCAGGGT AATTGCCACC GGCGACGGCA CCGAAGCCAT GGCGGCGCTC GCGGAGCATC GGGTGGATGC CGTGCTGACC GATATCGACA TGCCCGGCAT GAGCGGCTTC GATCTATTGC GCGAGATACG GCAGGCCAGC ATCGACATTC CGGTCTATGC CGTCAGCGCA AGCGCGCGGC CAGAGGACGT TGCCGCCGGG CAGGCCAAGG GCTTCACGGG CTATCTGACC AAGCCTGTCT CGCTTGCCAT GCTCGCCTCG GTTCTTGCAC GCGCCGAATG GCCCCGCGAT GGCCAGGGCA ACGACGCGCC CAATGACGAG GGGCTCCCGG AACTGCCCCG GATTCCCGGG CCCCATGTCG AGGCGTTCCT CGCGCAGACC CAGGCTGATC TCGATGACCT TGACGAAATC CTCGCGACGC AGGACCTGGC AGCGCTAACG CGCCTGCTGC ATCGGATCTC GGGAGGGCTG GCGGTGCTCG GTCGTTCGCA ACTGGCCGAA CTGTGCGAAG ACCTGCGCGG CTACGTTGCC GATGCGCCTG GCTGGAACGA AGAAATCGCG CTCCAGTCCG AGTACCTCGC CACGCAACTC AGACTGATCC GGCAAAGGCA CCAGCGCTTG CCCATGGGTT GA
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Protein sequence | MTPDTVEPNR NPDADSTRPA PPDLRAVKRN LQRERRVFSM VVLLLGLLVV AIASTAVLVR FNGSLRAQEQ MTRLYEQGVV DAVLERRSTL AASNLILELR ANGTLPVATG GRTGLCAKVD ASAPSDDVLQ QSCDQSVRAL LAASQRPSIE MISIGSGATY RYEAPDASGA ASQTVLPPMS PGAITQTVLT SFRDRDIDVL QAAREKRVEW FGVPGSAPGA DPEMVGASLV AKGSQLYAIA LTRIPLHVLL RDAGPNLPIP EPIVFDGVGA PLVPAAARTN AQRLDARLES KADGMFHWVP GYGWALRRPP LVSDVGHLIF ALPIGHQLQG MADELMVIGA IAGALLALLF AMYRYWNYRF LTGTYAEAAR AQRLLHQARL ASDAAASARV AFFASMSHEI RTPLASLLGN MELVARGPLP PDQRTRVGAM QVSAEGLLQI VNDVLDFSRI DVGELSIEPQ PIAVTDLLSR IAVAHAPLAA GRGLRFITVY GRDIPARLDL DPVRLTQIVN NLLGNAFKFT QAGKVVLRAR WADGALEIIV ADTGIGIPDE YKDRLFQPFS QVADNRLAQA RGTGLGLSIC SRLAERMGGR ISLDSILGVG TRVTVCVPPR IADAAPMARP GLPPSRTLVL SREPECLEGM LNQIDWGTCQ PSARMDLDRP VDAESYDCLL VADGFDPDRV LAWWPRPASI VWLKQLGPVV ATVRPDGGRE VSAYSLVGIH AAACAVITGL HPVTSDDDGG TGQLLSPLAG RLLLIAEDNL LNRDLLRDQL LALGARVIAT GDGTEAMAAL AEHRVDAVLT DIDMPGMSGF DLLREIRQAS IDIPVYAVSA SARPEDVAAG QAKGFTGYLT KPVSLAMLAS VLARAEWPRD GQGNDAPNDE GLPELPRIPG PHVEAFLAQT QADLDDLDEI LATQDLAALT RLLHRISGGL AVLGRSQLAE LCEDLRGYVA DAPGWNEEIA LQSEYLATQL RLIRQRHQRL PMG
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