| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4605 |
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| Symbol | |
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| ID | 4041466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1226504 |
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| End bp | 1230433 |
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| Gene Length | 3930 bp |
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| Protein Length | 1309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980026 |
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| Product | histidine protein kinase |
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| Protein accession | YP_586736 |
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| Protein GI | 94313527 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.292459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0589738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCG CCATGGCGCT GCCGGCGAAA CTGACCGTCG GCATGCTCGA CAACGGCTGG
CCTCCGTTCA CGATGCTCAA TGCCGGGCGG GCCGAAGGCA TCGGCATGGA TTTCCTTCAT
GAGGCTCTGC GCGGACACCA GATCACGTAC AGCGTGAAGG GGTATCCCGA CATGACGGCC
CTTCTGGCGG CGTTGTGCAA GGGCGATGTG GACGTGGTGC TCAATGTTGC CATCACGCCG
GCACGACGTC GGTGCCTCTC CTTCTCCGAG CCATACTTTG ATGGTGATGC CGTGGTGGTC
GGTCGTCCGT CCGCCGCGTT GGAAGAAGAC CTGCTTGCGT CCATGCAAAC CGGCCGCTTC
GCGATCGAGC CCGGTTATTA CATGGAGGGC ATTCTGCGCC AGCGTTATCC GAAGGCGCGC
ATGGTGCCCA TCAAGGACAC GACCGATGGA TTGCGCGCCA TCGTGAACGG GCGGGCCGAC
TACTACGCCA CCGTGCAGCC AGTGGCCGAG TATGCAATGG TTTCACCTGA GTTTGCGGGA
CTGAAGGTCC TCTCGCGCTA CCGGGAGCCA ACAGGAGCCA TTCACTTTGC GTTTCGATCC
AACGCGACGG AACTGCGTGA CGCGACCGAT GCCGGCCTGG CGGCGATTGA TCCAGCTCGC
CGCGCTGCCT TGCTGGCACA CTGGATAACC TCGCAGGTGG CCTCGCCCGA CAAGCCCCAG
AAATTCTTCC TGACCGACGA GGAGCGTGCG TTCCTGAAGT CGTTGCCAAC CTTGACGGTT
GGTGTCGACG CGGGGCTCGC GCCCTACACG TACCTGGACG AGAGTGGCCG CGCCAGCGGC
ATAGCGATTG ACTATCTGAG TTACCTTGGC GAGACCCTGG GCGTCCGCTT CCGACGCCAG
CCGACGACTG ACATCCAGCA GACCGTCGAG GCGCTGCATC AGGGCAAGAT CGATCTGATG
GCCGTAGCGG TGCCAGAGGA CCCCACGCTG CGCGGCTTGC CGGTATCCCG TCCGTACTCG
ACGTTTCCAG TGGTGGTGGC GGGCAGAAAC TCGGCCTTGC CGCTCGCACA CCTGCGCGAC
CTCACCGGAA AGCGAGTTGT CGTCACCGAC TCTGGCGGGG TTGGCGATTT CACCCGGCAC
GAGGTACCGG GCGTGAAGCT GGTGATCGCC CCGAATGTCC ACGCCGGACT CGACATGGTG
GCGCAGGGGA AAGCCGATGC TTATGTCGAC GATATCGTCT CGACCGATAT CGAACTGCGA
CGCAATTTTG CCGGCAAGCT ACGCGTGATC GGTTCGGGCG AGCACATGCT CAACAGCGGC
TTTGCGGTCA ACCCCGCGCT AGCCGGGCGA CTGCTGCCAT TGATCAATCG CGCACTCTCC
GTGCTACCGG AGGACCGCCG GCTGGATATC CAGAATCGCT ACGCCGGCAC CAGCTATGTG
CTGGAAACGT CGTGGCTGAA TGCGCTCTGG CGGGCGAGTC CAATCCTGAT CGGGATGATG
GTCATCCTCC TGATCCTGCT TCGTTCCCAG CGCCTGTACC GCAAGGAGGC TTCCATTCGT
CGCGAGGCCG AACGGGAGCT TTCGACCCAG TTGCGCTTCC AGTCGACGCT GATGGATGCC
ATCCCCCTGC CCATTGTGGT CAGTAACAAG GACGGCCGGT ATCTGCGGTT GAACGCATTC
TCCGAGTGGA TCACGGGGCG GTCATGGGCC GACATCGTAG GTCACACCAC CACGGAAGTA
CATTTCTGGG GCGAGGCGAA CAGCGCGCGG GTGGAGGAGG CGAGCCAGCG GGCCATCGAC
ACAGGCAGGC TGGTGCAACT CCAGTTGCAA CTGCAGGACA AGGAGGGCGT GGAGCGGCAT
TTCCTTCTCT ATATCAAGCC CTTTGTCGGC GAAAACAATG TCGAGGGACT GATCAACACC
GGCGTGGATG TGACGGAAAT CCGCCAGGCG GAGCTCGAGG CGCGCGAGGC ACAGGGCCGT
CTGGCCGACG TCACGCGCTA CCTGCCGATC ATGGTGTTCC AGGCACGCCA GTCGGGCCAC
CTAGGCCGGG GACCGATATG GGTGAGTGGC AATACCACGG ATCTGTTTGG CGTCGACGCC
GAAACCCTGG CGGTCAATCC CCCCACGATC GAAGCTTGTG TGCATCCCGA TGACCGGATG
TCCCTGCGTC GCGCCATCGC CAGGGCGCGG CGGGAGCTTC AGGTTCTGAA CCACGAAGTG
CGCCTGCGCA AGCTGGAAGG GTTTCGCTGG ACGCGTTTGC AGGCCGTGCC CCGTATCGAG
ATCGACGGCA GCGTGCTCTG GAATGGCTAT TGGCGTGACA CCCAGGCCGA GCATGAACGC
GCGGCTGCGC TGGCCAGCGC CAAGGAATCC GCGGAGGCGG CATCCCGTGC CAAGGATAGT
TTCCTGGCCA TGATGAGCCA TGAGATTCGC ACGCCGATGA ACGGCGTACT GGGGCTTGCG
GAACTGCTTT CCCATACGTC CCTGACGCCG GAACAATCCG CCACGGTCGG CATGATGGGG
GATTCGGCGA GCGCGTTGCT CCAGATTCTC GACGATATCC TGGACTACTC GAAGATTGAA
GCCGGCCGCA TTGACATTGA ATCCCGGCCA TTGGATATCC GCGAGCTTTG CGATTGCACC
ATCGGTGTGC TGGCGACACG CGCGCATGAG AAAGGCCTGC ATCTGCGGCT GCATGTGGGG
GCGGATGTTG CCGCCGTGGT ACTAGGCGAC AGCGTGCGCC TGCGCCAGGT CCTGTTTAAC
CTGCTCAGCA ACGCCATCAA GTTCACCGAA AGCGGCATGG TGTCGGTGTC CGCCGAGGTG
GTACAGGAAA CGGAGACCGC GCAAACCCTC CGGTGGCGCG TGACCGATAC CGGTATCGGC
ATCGAGCCGC AGAACCAGAG CCGGCTGTTC GATCCTTTCG TGCAGGCCGA CACGTCGACC
ACGCGCCGTT TCGGCGGCAC GGGCCTTGGC CTGGCAATCT GCCGGCGTCT GGTGCAGTTG
ATGGGTGGGC GCATCACACT GAAGAGCGAG CCCGGCATCG GCACCCAGGT CGAGGTCGAG
TTGAGCCTCC CGGTCAAGGA AAGACGCTAT TCAAAGCCGC CGCTGGCGGG CATCCAGTTC
GGGGTCCGCT TGCGGGATTG CGCGGTGGGC CAAGCGCTGA CGGACTTCCT GTCTGCCGCT
GGCGCGACCA ACTCTGCAAG CCAGGACGAG CGTGACAAGC CGCAGATGCT GTTCCTCAAC
GACGGCGAGT ATGCGCCGCC GTCGCCGGTC GGGCAGGCCA GCCCCATCGT CGTGCATGTC
ACGGAAAAAC CCAAACTGGC GGGCTACCGG CTGACAGAAT CCGATGTCCG CCTGAGCAGC
AATCCCGTGA GCTGGCGCGC GATCAACGCG GTGACGGTCG CCGCCATGCA GGGCCGGGCG
CACACTGTCG CTACCCATGC GCAGGCCAAG CCGAAGCCTG CTGCGCACGC AGTGACGCGA
GAACAGGCGC TGGCATCCGG CAGGTTGATC CTGGTGGCGG AAGACCACGA AACCAATCGT
ATCCTGCTGC AGCATCAGCT AAAGCTGCTC GGTTATGCCT GCGATGCCGT GGTCGACGGG
CAGCAGGCAC TCGAGGCCGC CGAGAAGACG GCCTACGCGA TGCTGATCAC GGATTGCCAC
ATGCCGAACG TCAACGGCTA TGAACTGGCA AGACAGCTTC GCGCCCGCGA AGCCGAAGCC
AAAACGGAAG CCGGAACGGA CGCCCATCGC CTCCCGATCG TCGCAATCAC GGCCAGCACC
GAAGCCGAAG AAGTCCAGCG CTGCAGAGAG GCCGGGATCG ACGAATGCAT GTTCAAGCCG
ACACAGCTCA ATGCCTTGCG CGCGTGTCTC CAGAGATGGA ACCCGGACAA TCAGGACGCC
GACGGGCGCA AGGGGTCCGG CAAGGCCTGA
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| Protein sequence | MQPAMALPAK LTVGMLDNGW PPFTMLNAGR AEGIGMDFLH EALRGHQITY SVKGYPDMTA
LLAALCKGDV DVVLNVAITP ARRRCLSFSE PYFDGDAVVV GRPSAALEED LLASMQTGRF
AIEPGYYMEG ILRQRYPKAR MVPIKDTTDG LRAIVNGRAD YYATVQPVAE YAMVSPEFAG
LKVLSRYREP TGAIHFAFRS NATELRDATD AGLAAIDPAR RAALLAHWIT SQVASPDKPQ
KFFLTDEERA FLKSLPTLTV GVDAGLAPYT YLDESGRASG IAIDYLSYLG ETLGVRFRRQ
PTTDIQQTVE ALHQGKIDLM AVAVPEDPTL RGLPVSRPYS TFPVVVAGRN SALPLAHLRD
LTGKRVVVTD SGGVGDFTRH EVPGVKLVIA PNVHAGLDMV AQGKADAYVD DIVSTDIELR
RNFAGKLRVI GSGEHMLNSG FAVNPALAGR LLPLINRALS VLPEDRRLDI QNRYAGTSYV
LETSWLNALW RASPILIGMM VILLILLRSQ RLYRKEASIR REAERELSTQ LRFQSTLMDA
IPLPIVVSNK DGRYLRLNAF SEWITGRSWA DIVGHTTTEV HFWGEANSAR VEEASQRAID
TGRLVQLQLQ LQDKEGVERH FLLYIKPFVG ENNVEGLINT GVDVTEIRQA ELEAREAQGR
LADVTRYLPI MVFQARQSGH LGRGPIWVSG NTTDLFGVDA ETLAVNPPTI EACVHPDDRM
SLRRAIARAR RELQVLNHEV RLRKLEGFRW TRLQAVPRIE IDGSVLWNGY WRDTQAEHER
AAALASAKES AEAASRAKDS FLAMMSHEIR TPMNGVLGLA ELLSHTSLTP EQSATVGMMG
DSASALLQIL DDILDYSKIE AGRIDIESRP LDIRELCDCT IGVLATRAHE KGLHLRLHVG
ADVAAVVLGD SVRLRQVLFN LLSNAIKFTE SGMVSVSAEV VQETETAQTL RWRVTDTGIG
IEPQNQSRLF DPFVQADTST TRRFGGTGLG LAICRRLVQL MGGRITLKSE PGIGTQVEVE
LSLPVKERRY SKPPLAGIQF GVRLRDCAVG QALTDFLSAA GATNSASQDE RDKPQMLFLN
DGEYAPPSPV GQASPIVVHV TEKPKLAGYR LTESDVRLSS NPVSWRAINA VTVAAMQGRA
HTVATHAQAK PKPAAHAVTR EQALASGRLI LVAEDHETNR ILLQHQLKLL GYACDAVVDG
QQALEAAEKT AYAMLITDCH MPNVNGYELA RQLRAREAEA KTEAGTDAHR LPIVAITAST
EAEEVQRCRE AGIDECMFKP TQLNALRACL QRWNPDNQDA DGRKGSGKA
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