| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4593 |
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| Symbol | |
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| ID | 4041454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1212124 |
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| End bp | 1213014 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980014 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_586724 |
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| Protein GI | 94313515 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000328095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00511566 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACGCA TTGCGCTCAA GGTAGACGTG GACACGCTGC GCGGCACGCG CGAAGGCGTG
CCCGCGCTGC TGTCCATGCT GTCCGCCGCC GAGGCGGAAG CCACGTTCCT GTTCAGCCTC
GGCCCGGATC ACACGGGCTG GGCGCTGCGC CGGGTGTTCC GTCCCGGTTT CCTGAAGAAG
GTCTCGCGGA CTTCCGTGGT GTCGAACTAC GGCCTGCGCA CGCTGATGTA CGGCGTGCTG
CTGCCGGGGC CCGACATCGG CCGCAAGGGC GCTGCCGAAA TGCGTGCGGC CGCCGCAGCG
GGCCACGAGT GCGGCATCCA CACCTGGGAC CACGTCTACT GGCAGGACAA CGTGCGCGAG
CGCGATGCGG CCTGGACGCG CCGACAGATG CAGCAATCGT TCGAGCGCTT CACCGATATC
TTCGGTGCCG CCCCGACGAC GCATGGCGCG GCCGGCTGGC AGATGAACAA CGAGGCGTTT
CGCCAGATCG ACGACTGGGG CATGGTCTAC GCGTCCGATG GCCGCGGGAC GGCGCCCTAC
ATTCCGACGG TCGATGGCAA GGCCTGCCGC CACGTGCAGA TGCCGACCAC GCTGCCGACG
CTCGACGAGC TGATCGGTGT GGACGACCTG ACCGAAGACA ACGTGCACAA AGCCGTGCTC
AAGCTGACCG AGGGCGACGG CGACCACATT TTCACGCTCC ATACAGAGCT GGAAGGCGGA
AAGCTGGCGC CGGTATTCAA GCGACTGCTG TCAGGCTGGC GCGCGCAAGG TCACCAGCTT
GTGTCGATGG CAACGTATTA CCAGCACATC GATCGCAGCG ACCTGCCGCA AATGCCCGTT
ACCTGGGGTG AAATCCCGGG CCGAAGCGGC GAACTGATTA TTCAGCCCTG A
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| Protein sequence | MARIALKVDV DTLRGTREGV PALLSMLSAA EAEATFLFSL GPDHTGWALR RVFRPGFLKK
VSRTSVVSNY GLRTLMYGVL LPGPDIGRKG AAEMRAAAAA GHECGIHTWD HVYWQDNVRE
RDAAWTRRQM QQSFERFTDI FGAAPTTHGA AGWQMNNEAF RQIDDWGMVY ASDGRGTAPY
IPTVDGKACR HVQMPTTLPT LDELIGVDDL TEDNVHKAVL KLTEGDGDHI FTLHTELEGG
KLAPVFKRLL SGWRAQGHQL VSMATYYQHI DRSDLPQMPV TWGEIPGRSG ELIIQP
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