Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4590 |
Symbol | arnC |
ID | 4041451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1209137 |
End bp | 1210138 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980011 |
Product | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase |
Protein accession | YP_586721 |
Protein GI | 94313512 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00472889 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00198336 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCAAACGC CTCTCTCTCT AAGCTCCGTC GAGGTCTCGG TCGTCATCCC CGTCTACAAC GAGGAGGGTG GCCTGCAGGC GCTGTTCGAC CGCGTCTATC CGGCGCTGGA CAGCCTGGGC GAATCCTACG AGGTCATCTT CGTCAATGAC GGCAGCGTCG ACCGCTCGCC GCAGATGCTG GCCGCGCAGT TCCACAAGCG CCCGGACGTG ACCCGGGTCA TCCTGTTCAA CGGCAACTTT GGCCAGCACA TGGCCATCCT GGCCGGCTTC GAGCACACGC GCGGACGCAT CGTGATCACG CTCGACGCCG ACCTGCAGAA CCCGCCCGAG GAAATCCCCC GGCTGGTGGC CGAGATGCGC AAGGGCCATG ACTACGTCGG CACGATTCGC CGCCAGCGTA ACGACTCCGC GTTCCGCCGC TACGCGTCGC GCGCGATGAA CCGCCTGCGC GAGAAGATCA CGAAGATCAA GATGACGGAC CAGGGCTGCA TGTTGCGCGC CTACGATCGC AACGTCATCG ACACGATCAA TGCGTGCCGC GAAGTCAACA CGTTCATTCC CGCGCTGGCC TACACGTTCT CGTCGAACCC GGTGGAGATC GAGGTCGGCC ACGAGCAGCG CCACGCTGGC GAGTCAAAGT ATTCGCTCTA CCAACTGATC CGCCTGAACT TCGACTTGGT CACCGGCTTC TCGATCGTGC CGCTGCAATG GTTCTCGGCG ATCGGCACGG TGCTGTCGAT CTCTTCGGCC GGACTGTTCG TGATCCTGCT GATTCGCCGC TTCCTGCTCG GCTCTGAAGT CCAGGGTGTG TTCACGCTGT TCGCACTCAA CTTCTTCCTG GTCGGCATCA TGCTGTTCGG CATCGGCCTG CTGGGTGAGT ACGTCGGCCG GATCTATCAG GAAGTGCGCG ACCGCCCGCG CTACCGCATC CAGGCGGTGC TTGAGCGTGA CCCCCGTGAC CCGAAGACCG ACAACGCAGC GGAGGCCTCG TGCGCGCAGT AG
|
Protein sequence | MQTPLSLSSV EVSVVIPVYN EEGGLQALFD RVYPALDSLG ESYEVIFVND GSVDRSPQML AAQFHKRPDV TRVILFNGNF GQHMAILAGF EHTRGRIVIT LDADLQNPPE EIPRLVAEMR KGHDYVGTIR RQRNDSAFRR YASRAMNRLR EKITKIKMTD QGCMLRAYDR NVIDTINACR EVNTFIPALA YTFSSNPVEI EVGHEQRHAG ESKYSLYQLI RLNFDLVTGF SIVPLQWFSA IGTVLSISSA GLFVILLIRR FLLGSEVQGV FTLFALNFFL VGIMLFGIGL LGEYVGRIYQ EVRDRPRYRI QAVLERDPRD PKTDNAAEAS CAQ
|
| |