Gene Rmet_4590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4590 
SymbolarnC 
ID4041451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1209137 
End bp1210138 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content63% 
IMG OID637980011 
ProductUndecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 
Protein accessionYP_586721 
Protein GI94313512 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00472889 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00198336 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAAACGC CTCTCTCTCT AAGCTCCGTC GAGGTCTCGG TCGTCATCCC CGTCTACAAC 
GAGGAGGGTG GCCTGCAGGC GCTGTTCGAC CGCGTCTATC CGGCGCTGGA CAGCCTGGGC
GAATCCTACG AGGTCATCTT CGTCAATGAC GGCAGCGTCG ACCGCTCGCC GCAGATGCTG
GCCGCGCAGT TCCACAAGCG CCCGGACGTG ACCCGGGTCA TCCTGTTCAA CGGCAACTTT
GGCCAGCACA TGGCCATCCT GGCCGGCTTC GAGCACACGC GCGGACGCAT CGTGATCACG
CTCGACGCCG ACCTGCAGAA CCCGCCCGAG GAAATCCCCC GGCTGGTGGC CGAGATGCGC
AAGGGCCATG ACTACGTCGG CACGATTCGC CGCCAGCGTA ACGACTCCGC GTTCCGCCGC
TACGCGTCGC GCGCGATGAA CCGCCTGCGC GAGAAGATCA CGAAGATCAA GATGACGGAC
CAGGGCTGCA TGTTGCGCGC CTACGATCGC AACGTCATCG ACACGATCAA TGCGTGCCGC
GAAGTCAACA CGTTCATTCC CGCGCTGGCC TACACGTTCT CGTCGAACCC GGTGGAGATC
GAGGTCGGCC ACGAGCAGCG CCACGCTGGC GAGTCAAAGT ATTCGCTCTA CCAACTGATC
CGCCTGAACT TCGACTTGGT CACCGGCTTC TCGATCGTGC CGCTGCAATG GTTCTCGGCG
ATCGGCACGG TGCTGTCGAT CTCTTCGGCC GGACTGTTCG TGATCCTGCT GATTCGCCGC
TTCCTGCTCG GCTCTGAAGT CCAGGGTGTG TTCACGCTGT TCGCACTCAA CTTCTTCCTG
GTCGGCATCA TGCTGTTCGG CATCGGCCTG CTGGGTGAGT ACGTCGGCCG GATCTATCAG
GAAGTGCGCG ACCGCCCGCG CTACCGCATC CAGGCGGTGC TTGAGCGTGA CCCCCGTGAC
CCGAAGACCG ACAACGCAGC GGAGGCCTCG TGCGCGCAGT AG
 
Protein sequence
MQTPLSLSSV EVSVVIPVYN EEGGLQALFD RVYPALDSLG ESYEVIFVND GSVDRSPQML 
AAQFHKRPDV TRVILFNGNF GQHMAILAGF EHTRGRIVIT LDADLQNPPE EIPRLVAEMR
KGHDYVGTIR RQRNDSAFRR YASRAMNRLR EKITKIKMTD QGCMLRAYDR NVIDTINACR
EVNTFIPALA YTFSSNPVEI EVGHEQRHAG ESKYSLYQLI RLNFDLVTGF SIVPLQWFSA
IGTVLSISSA GLFVILLIRR FLLGSEVQGV FTLFALNFFL VGIMLFGIGL LGEYVGRIYQ
EVRDRPRYRI QAVLERDPRD PKTDNAAEAS CAQ