| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4587 |
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| Symbol | |
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| ID | 4041448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1205867 |
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| End bp | 1207609 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980008 |
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| Product | 4-amino-4-deoxy-L-arabinose transferase famly protein |
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| Protein accession | YP_586718 |
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| Protein GI | 94313509 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.467811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00235172 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAGTT CCTCGCCCTC GCGTCACGAC GGGCTGCCCC CGGGCATGAT CGCCCCAGTG
GTGCTGGTCG TCATCGCGGT ATTGCTGGTC TGGTTCGGCA CGCTCGATGC CCGCCACCTG
CTACGCCCGG ACGAGGGCCG ATACGCAGAA ATCTCGCGCG AAATGTTCGC CACGGGCGAC
TGGGTGACGA TTCGCTATAA CGCACTCAAG TACTTCGAGA AGCCCCCCTT CCATATGTGG
GTGACGACGA TCGGCTACGA ACTGTTCGGC GTCGGAGACT GGCAAGCCCG GCTCGCCGTG
GCGCTGTCCG GCCTTGTTGG TCTCGTGGTC ACCATGATGG CCGTAATCCG TTGGTATGGC
GCGCGTGCCG GGCTGCTGGC CGGGCTGGCG TTGCTGGCCA TGCCGATGTG GAGCGTCACC
GGCCATTTCA ATTCGCTGGA CATGACCCTC TCGGGTGCGC TGGCGTGCGT GCTGGCCTTC
ATGCTGCTGG CCCAGCACCC CGATGCGTCG CCGGCGGCCC GCCGTGGCTG GATGCTGGCC
TGCTGGGCGG CCATGGGGGT GGCGATCCTG ACCAAGGGTC TGGTGGGCAT CGCCCTGCCC
GGCCTGGTGC TGGTGGTCTA CACCCTCGTG ACACGCAACC TTGCCCTGTG GGGCCGCCTG
CACCTGGTGA GCGGCATCCT CGCCATGCTC GTGGTCACCG TGCCCTGGTT CTGGCTGATT
TCCTCGCGCA ACCCCGAGTT TCCGCATTTC TTCTTTATCC ACGAGCACTG GGATCGCTAT
ACCTCGACCG TGCATTCGCG CAAGGGATCG ATCTGGTATT TCGTACCGCT GCTGCTGGCC
GGGACGCTGC CCTGGCTGGG CCTGACCCCG CGCATGTGGA CCGCGGTGAG CGAGCGCGCT
GGCGCGGTGC GCGGCATGGG CGCCAAGCCG TTCCAGCCCG CCCTGCTGGC ATTCATCTGG
TTCGCGGCGA TCTTCGTGTT CTTCAGCCTG TCCGGCTCGA AGCTGCCCGG CTATATCGTG
CCGGTGTTCC CGGCGCTGGC CATCCTGGTC GCCGTGGCGC TGGAACAGAT CAACGAACGG
TCGTGGCTGC GGCAGATCAA TGCGGTCACG GTGCTGTCGG TGGCCGGCAT CGTCGCTTCG
CCGTTCGTCG CCACGCTCGG CAACGAGACC AACCCCAATG CCGTGTTCCG CGTCTTCGCC
ATCTACGTTG GCGTGGCGTT TGCCGTACTT TTGATCGGAA TGGTGCTGGC GCGCCGCCTG
CTGCGCGCCT ATGGTCTGCT GCCAAGCATC ACCGCCTTCT CGCTCGCCTT CTTCCTGACC
TGCACCATTG CCCTCATGGG CCACGAAGTG ATGGGGCGCC GGGCATCAGG CGTCGACCTG
GTGCCGGCCA TCAAGGCCGT GCTCAAGGAC GACATGCCGC TCTATGGCGT GGGTGTTCTG
GATCACACGC TGCCGTTCTA CCTGGGCCAC ACGCTGGTCA TGGTGGCGGC CCCGGACGAA
CTCGAATTCG GCACCCAGCA GGAGCCGGAC AAGTGGATTC CCACCATGGA CGGCTTCATC
GCCAAGTGGC GTGACGGCCA GCCGGCCCTC GGCATCATGT CTCCGGACAC CTACGATAGT
CTGGCGGCCA ACCACCTGCC GATGTACGTG GTGGCTCGCG ACGTGCGCCG CGTGGTAGTC
AGCAATTTCC CGCCGCCGGC CGCGCCGGCA CCGTCGCCCA AGGACTCCAG AACCGCGCCA
TGA
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| Protein sequence | MRSSSPSRHD GLPPGMIAPV VLVVIAVLLV WFGTLDARHL LRPDEGRYAE ISREMFATGD
WVTIRYNALK YFEKPPFHMW VTTIGYELFG VGDWQARLAV ALSGLVGLVV TMMAVIRWYG
ARAGLLAGLA LLAMPMWSVT GHFNSLDMTL SGALACVLAF MLLAQHPDAS PAARRGWMLA
CWAAMGVAIL TKGLVGIALP GLVLVVYTLV TRNLALWGRL HLVSGILAML VVTVPWFWLI
SSRNPEFPHF FFIHEHWDRY TSTVHSRKGS IWYFVPLLLA GTLPWLGLTP RMWTAVSERA
GAVRGMGAKP FQPALLAFIW FAAIFVFFSL SGSKLPGYIV PVFPALAILV AVALEQINER
SWLRQINAVT VLSVAGIVAS PFVATLGNET NPNAVFRVFA IYVGVAFAVL LIGMVLARRL
LRAYGLLPSI TAFSLAFFLT CTIALMGHEV MGRRASGVDL VPAIKAVLKD DMPLYGVGVL
DHTLPFYLGH TLVMVAAPDE LEFGTQQEPD KWIPTMDGFI AKWRDGQPAL GIMSPDTYDS
LAANHLPMYV VARDVRRVVV SNFPPPAAPA PSPKDSRTAP
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