| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4585 |
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| Symbol | ilvD |
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| ID | 4041446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1202465 |
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| End bp | 1204327 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980006 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_586716 |
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| Protein GI | 94313507 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00307553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTGAGT ACCGATCACG AACTTCGACG CACGGCCGGA ACATGGCGGG TGCTCGCGCC
TTGTGGCGCG CCACCGGGAT GAAGGATGGC GATTTCGGCA AGCCCATCAT CGCCGTGGTG
AACTCGTTTA CCCAGTTCGT GCCGGGCCAT GTCCATTTGC GCGACCTCGG CGCGCTGGTT
GCGAAGGAGA TCGAAGCGGC CGGCGGCGTG GCCAAGGAAT TCAACACGAT CGCGGTGGAC
GATGGGATCG CCATGGGCCA CGGAGGCATG CTCTATTCGC TGCCCTCGCG CGAGCTGATC
GCCGACTCGG TGGAATACAT GGTCAACGCG CATTGCGCCG ACGCCATGGT CTGTATTTCC
AATTGCGACA AGATCACCCC GGGCATGCTG ATGGCCGCGA TGCGGCTGAA CATTCCCGTG
GTGTTCGTCT CCGGCGGCCC GATGGAGGCC GGCAAGGTCA AGTCCCCAAC GGACGGCCAG
GTGATCGCAA AGATCGACCT GATCGACGCC ATGATCAAGG CCGCGGACCC GAAGGTCAGC
GACGCTGAAG TGGCCGAAGT GGAGCGCAGC GCCTGCCCGA CATGCGGTTC CTGCTCGGGG
ATGTTCACGG CGAACTCGAT GAATTGCCTG ACCGAGGCGA TTGGCCTGGC GTTGCCGGGC
AACGGCACGA TCGTTGCCAC CCACACATGG CGCAAGGGCC TGTTCGAACA GGCGGGCCGC
CTGGTCGTGG ACCTGTGCCG CCGCTACTAC CAGGAAGAGG ACGCATCGGT CCTGCCGCGC
AACATCGCTA CCAAGTCGGC ATTCGAGAAT GCCATGGCAC TGGACGTGGC CATGGGCGGT
TCGACCAATA CCGTGCTGCA CCTGCTGGCG GCAGCCCAGG AAGCCGGTGT CGATTTCACG
ATGTCCGACA TCGATCGCAT CTCGCGGAAG GTGCCGTGCC TGTGCAAGGC CGCACCGGCC
ACCGACAAGT ACCACATCGA AGACGTGCAT CGCGCGGGCG GCATCCTTGG CATTCTCGGC
GAGCTGGCGC GTGCCGAGTT GCTGGATCTG TCGTGCGGCA ACGTGCATAG CGGCACGCTT
GGCAATGCCA TTTCCCAGTG GGATGTCGTT GGTGGTGCGG GCGAGGACGC GCAGAAGTTC
TTCCGCGCTG CGCCGGGCGG CATTCCGACG ACCGTCGCGT TCAGCCAGGC GGCCACCTTC
GAGTCACTGG ATACCGACCG AAAGACTGGC TGCATCCGGA ACAAGCAGAA CGCGTATTCG
AAGGACGGCG GTCTCGCCGT GCTCTACGGC AACCTCGCGG AGAAGGGCTG CATCGTCAAG
ACCGCTGGCG TGGACGAATC GCAATGGGTC TTCTCCGGGC GCGCCCGTGT CTTCGAAAGC
CAGGACGAAG CCGTCGACGC CATTCTGGGC GACAAGGTCG TGGCTGGTGA CGTTGTCGTG
ATTCGTTACG AAGGTCCCAA GGGTGGCCCG GGCATGCAGG AAATGCTCTA TCCCACGTCG
TACCTGAAGT CGAAGGGCCT GGGCAAGACC TGCGCGCTGT TTACCGACGG TCGGTTCTCC
GGTGGGTCGT CCGGGCTGGT CATCGGACAT GCCTCGCCGG AAGCCGCCGA AGGCGGCACG
ATCGGCCTGG TGGAGGACGG CGATCTCATC GAGATCGACA TTCCGCAGCG CAAGATGCAC
CTGGCGGTGT CGGACGAAAC CCTGGCGCGC CGTCGCGAAG CCATGGAGGC GCGCGGTGAC
AAGGCGTGGG AGCCGGTGGA TCGTGTGCGC GTAGTGTCCC AGGCATTGCA GGCGTACGCT
GCGCTCGCTA CTTCGGCGGA TCGCGGCGCG GTGCGCGATA TCTCCCAGCT CAAGCGCAAG
TAA
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| Protein sequence | MPEYRSRTST HGRNMAGARA LWRATGMKDG DFGKPIIAVV NSFTQFVPGH VHLRDLGALV
AKEIEAAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPV VFVSGGPMEA GKVKSPTDGQ VIAKIDLIDA MIKAADPKVS
DAEVAEVERS ACPTCGSCSG MFTANSMNCL TEAIGLALPG NGTIVATHTW RKGLFEQAGR
LVVDLCRRYY QEEDASVLPR NIATKSAFEN AMALDVAMGG STNTVLHLLA AAQEAGVDFT
MSDIDRISRK VPCLCKAAPA TDKYHIEDVH RAGGILGILG ELARAELLDL SCGNVHSGTL
GNAISQWDVV GGAGEDAQKF FRAAPGGIPT TVAFSQAATF ESLDTDRKTG CIRNKQNAYS
KDGGLAVLYG NLAEKGCIVK TAGVDESQWV FSGRARVFES QDEAVDAILG DKVVAGDVVV
IRYEGPKGGP GMQEMLYPTS YLKSKGLGKT CALFTDGRFS GGSSGLVIGH ASPEAAEGGT
IGLVEDGDLI EIDIPQRKMH LAVSDETLAR RREAMEARGD KAWEPVDRVR VVSQALQAYA
ALATSADRGA VRDISQLKRK
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