| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4580 |
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| Symbol | dppF |
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| ID | 4041441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1196089 |
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| End bp | 1197066 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980001 |
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| Product | oligopeptide/dipeptide ABC transporter ATP-binding protein |
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| Protein accession | YP_586711 |
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| Protein GI | 94313502 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.19042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00501998 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATCCGA TTCTTCGCGT CGAAAACCTG AAGGTGCACT TTCCGGTTAC GCAAGGCGTG
CTGTTCAAAC GCCAGGTTGG CACCGTGAAG GCCGTCGACG GCGTCTCGTT CACGCTCAAT
CGCGGCGAGA CGCTGGGGCT GGTCGGCGAA AGCGGCTGCG GCAAATCCAC CACCGGTCTG
GCCATCATGA AGATGCTGCC AGCCAGTGAC GGCCGCATCC TGTTCGATGG CGAGGACCTG
GCTGGCTTCA AGGGTCAGCG GCAGAAGCAG TTCCGGCGCT CCGTGCAGAT GGTCTATCAG
GACCCGTTCG CATCGCTGAA TCCGCGCATG AAGGTCCGTG ACCTGATTGC GGAACCGCTC
GAGGTACACG GCATGGCCGG CGACCGGCAA GCCGTGCAGA CGCGCGTGAG CGAGTTGCTG
GACATGGTGG GCCTGCTGCC CTATATGGCG GACCGCTACC CGCACGAGTT CTCCGGCGGC
CAGCGTCAGC GCATTGGCAT CGCACGCGCG TTGGCGCTGG AGCCGAGCCT GATTGTCTGC
GACGAGCCCG TGTCGGCCCT GGACGTCTCG ATCCAGGCGC AGGTGGTCAA CGTGTTCATG
GAGTTGCAGC GCACGCTCGG CCTGTCCTAT CTGTTCATCG CGCACGACCT GGCGGTGGTA
CGGCATATCA GCGATCGCGT TGCCGTGATG TACCTCGGCC GCATCGTGGA GATCGCCACG
CGCCGTCAGC TCTACGCCTC TCCGCTGCAT CCCTACACCC GGGCGCTGTT GTCGGCCGTG
CCGGTCGCCG ATGTGGAGAC CGAGCGACGG CGCCAGCGAA TCGTACTGAA AGGCGAAGTG
CCGAGCCCGA TGAATCCGCC CTCAGGCTGC CGCTTCCACG CGCGCTGCCC GATGGCAATG
CCGCAATGCC ACAACGACGA CCCGCCGTTG CGCGACCGAG GCGACGGGCA GATGGTTGCC
TGTCACCTGG CCGAGTGA
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| Protein sequence | MDPILRVENL KVHFPVTQGV LFKRQVGTVK AVDGVSFTLN RGETLGLVGE SGCGKSTTGL
AIMKMLPASD GRILFDGEDL AGFKGQRQKQ FRRSVQMVYQ DPFASLNPRM KVRDLIAEPL
EVHGMAGDRQ AVQTRVSELL DMVGLLPYMA DRYPHEFSGG QRQRIGIARA LALEPSLIVC
DEPVSALDVS IQAQVVNVFM ELQRTLGLSY LFIAHDLAVV RHISDRVAVM YLGRIVEIAT
RRQLYASPLH PYTRALLSAV PVADVETERR RQRIVLKGEV PSPMNPPSGC RFHARCPMAM
PQCHNDDPPL RDRGDGQMVA CHLAE
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