Gene Rmet_4577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4577 
SymboldppC 
ID4041438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1192230 
End bp1193156 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID637979998 
Productbinding-protein-dependent transport systems inner membrane protein 
Protein accessionYP_586708 
Protein GI94313499 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0046213 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACACC CCTCCGTCGA TCCACGCGCC GTGTCCCCTT CGCTCGTGAC GGCCCAGGCG 
CCTCCCGCCT CGCGCAGGCG CTCCCGGTTT CCCATGATGC GCCGACTGTT CCGCGACAAA
CCGCTCGGCG CGGCCGGCGC CGTGATCTGC GCGATCTTCT TGTTCTGCGG CGTCTTTGCC
GGCTGGCTCG CGCCATACGG TGTCAACGAG ATCAACATGA TGGCGCGGCT GCAACCACCG
TCATGGGCGC ATCTCTTCGG CACCGACAAT CTCGGCCGTG ACATCTTCTC CCGCTGCCTG
TATGGCGCGC AGCTGTCGGT GGTGATCGGC CTCTCGGCGG CCACGCTGGC CACGCTGGTT
TCCCTCGTGC TTGGCATCCT GTGCGGCTAT CTGGGCGGCA AGCTGGACCT GGTGGTGCAG
CGAATGGTCG ACGCCTGGAT GAGTTTTCCG GACCTCATCA TCCTGATCGT CGTGGTCTCG
GTGCTGGGCC CGGGCAGTTG GCAAATCGTC TGCACGCTGG GTCTGCTGCT CGGTATCGGC
GGCTCCAGAA TCGTGCGCGG GGCCGTGGTA TCGGTGCGCG AGAACATGTA CGTGCACGCG
GCGCAATCGA TCGGCGCCTC CACCAGCCGC ATCCTGTGGC GGCACATCCT GCCCAACGTG
CTGCCGCCGG TGATCGTCCT GTTCACGACC CGCGTCGGCA CCGCGATCCT GGCGGAATCG
GGACTGTCAT TCCTGGGCCT CGGCGTGCCG CCGCCCGCCC CGACCTGGGG CGGCATGCTG
TCGGGCGACG GGCGCACCTT CATGTTCCAG GGGCCGTGGC TCGCGCTTGC GCCAGGCATC
TGCCTGACGG TGGTGGTCTA CGCCATCAAC GTCTATGGCG ATGCCATGCG CGACCTGCTC
GACCCACGCC TACGCGGCGG CCGCTGA
 
Protein sequence
MAHPSVDPRA VSPSLVTAQA PPASRRRSRF PMMRRLFRDK PLGAAGAVIC AIFLFCGVFA 
GWLAPYGVNE INMMARLQPP SWAHLFGTDN LGRDIFSRCL YGAQLSVVIG LSAATLATLV
SLVLGILCGY LGGKLDLVVQ RMVDAWMSFP DLIILIVVVS VLGPGSWQIV CTLGLLLGIG
GSRIVRGAVV SVRENMYVHA AQSIGASTSR ILWRHILPNV LPPVIVLFTT RVGTAILAES
GLSFLGLGVP PPAPTWGGML SGDGRTFMFQ GPWLALAPGI CLTVVVYAIN VYGDAMRDLL
DPRLRGGR