| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4576 |
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| Symbol | dppB |
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| ID | 4041437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1191274 |
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| End bp | 1192230 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979997 |
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| Product | peptide ABC transporter permease |
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| Protein accession | YP_586707 |
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| Protein GI | 94313498 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.752948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00438876 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCT ACTTCGTGCG TCGCCTGCTG GCACTGATAC CGACGCTGCT CTTCGCCAGC
ATCATCGTGT TCACCATCGT GCGCCTGGTG CCCGGCGACG TGGTCGATCT CATGCTGAGT
CAGAACGACA TCAGCGCCGA TGCCCTCACC CGCGAGCAAC TGGTCCACGC GCTAGGGCTC
GACCGTCCTA TCTGGGATCA ATACCTGCGC TGGGTCACCA ATATCGTGCT GCACGGTGAT
CTGGGGCAGT CCCTTTGGCA AAGCGAGCCG GTCCTGAAAA TGGTGATGGC CCGAATCCCG
GCCACCTTCT CGCTAGGTGT GCTGGCCCTG TTCGTGGCAC TGACGGTGGC GCTGCCCATC
GGGATCGTGT CGGCCACCCG CCAGGACAGC GCCGTCGACT ACGTGGCGCG GTCGTTCTCC
ATCCTGATGC TGGCCGTCCC CAGCTTCTGG CTCGGCACGA TGGTGATCGT GTTCCCGTCA
GTGTGGTGGG GCTGGTCCCC CGACGTGCGC TACATCCCCT TTCTCGAAGA CCCGGTGCAG
CACGTGAAAC AGATGCTGGT GCCAGCCATC GTGCTGGGCA TGGCGCTGTC CGCCATCACG
ATGCGGATGA CGCGCACCAT GATGCTGGAG GTACTGCGGC AGGACTATAT CCGCACAGCC
TGGGCCAAGG GACTGAACGA ACGACAGGTC ATCTTCCGCC ATGCGCTGCG CAATGCGTTG
ATTCCGGTGG TGACCCTCAT CGGGCTGCAG GCACCGCTGC TGATCGGTGG CGCCGTCGTC
ATCGAACAGA TCTTCGCGGT ACCGGGCATG GGCCTGTTGC TGCTCGATGC CGTGCACCAG
CGGGACTATC CGGTCATCAC TGGTGTCTTT CTCGTGGTCG GCGTGGCGGT GATGCTGATC
AATCTGCTAG TAGACCTGAG CTACGGCCTG TTCGACCCCA AAGTGAGGCA CCACTGA
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| Protein sequence | MSAYFVRRLL ALIPTLLFAS IIVFTIVRLV PGDVVDLMLS QNDISADALT REQLVHALGL
DRPIWDQYLR WVTNIVLHGD LGQSLWQSEP VLKMVMARIP ATFSLGVLAL FVALTVALPI
GIVSATRQDS AVDYVARSFS ILMLAVPSFW LGTMVIVFPS VWWGWSPDVR YIPFLEDPVQ
HVKQMLVPAI VLGMALSAIT MRMTRTMMLE VLRQDYIRTA WAKGLNERQV IFRHALRNAL
IPVVTLIGLQ APLLIGGAVV IEQIFAVPGM GLLLLDAVHQ RDYPVITGVF LVVGVAVMLI
NLLVDLSYGL FDPKVRHH
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