Gene Rmet_4572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4572 
Symbol 
ID4041433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1185347 
End bp1186585 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID637979993 
Producthypothetical protein 
Protein accessionYP_586703 
Protein GI94313494 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.540224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00953157 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGATC ATATCGTTCT GACCTCGCAC ACACGCCGCG ACAAGCCGGC CGAGCCGATT 
CACTGGGGCG CACCCACGGC GGCCGAGCGG GGGCCGGTCA TTGCCAGCCT GACAGACCCC
GCGCAGCGCA ACGTTATTGG TACCCACGCT GGCGCCTATG CGATCTATCG CGCGCTGGCA
GTGGCGGCGG GCAGCCTGCA GCGCGCGCAT CGTCCCGACC TGACCGATAC ATCCCCGGCC
GAAGCCATCG GCCCGCACCC GCAGTGGGGC GATCCGGACA GGATCGTGTC GCTGGATCCC
TGGGGCCACC TGGTCTCCAC CGTCTTCGCC GACCGCATCG CCGCCGGGGT GGACATCCGT
CCGACCATCG CCATCACGCG TGCACATATC AACATGCCCG AACTCATGGC CGCGATCTCG
GCCGGACGGC TCAAGCCCGA CGGCGACATC CTCGAGGCCA ATGGCGACGT GCGCGTGACC
AAGGCGGCGG TGGACCCGGT CTGGTACCTG CCCGGCATCG CGCGCCGCTT CAATATCAAG
GAGAGCGTGC TGCGCCGCAG CCTGTTCGAG CAGACCGGCG GCATGTTTCC CGAACTTGTG
ACGCGACCCG ATCTGAAGGT GTTCCTGCCT CCGATCGGCG GCATGACGCT CTATTTTTTC
GGCGATGTCA CAAAGCTGGG CCAGCCCGAT ACCCGCGTCG CCTGCCGCGT GCATGACGAA
TGCAATGGCT CCGACGTGTT CGGGTCGGAC ATCTGCACAT GCCGCCCGTA TCTGGCGCAC
GGTATCGAGG TTTGTATCGA GATGGCGCAG CAGGGTGGCG TGGGCCTGGT GGTCTATAAC
CGGAAGGAAG GCCGCGCGCT TGGCGAGGTG ACGAAGTTCC TGGTCTACAA CGCGCGCAAG
CGCCAGGTGG GCGGCGACCG CGCCGAAACC TACTTCGAAC GTACCGAATG CGTGGCCGGC
GTGCAGGACA TGCGGTTCCA GGAATTGATG CCGGATGTAT TTCACTGGCT CGGGATCAGG
AGGATCGATC GCTGGGCCTC GATGAGCAAC ATGAAGCACG GCGCGCTGAC GGCGCAGGGT
ATCGAGGTGG TGGAGCAGGT GGCGATTCCC GAGTCCCTGA TCCCGGCCGA TGCGCGCGTG
GAAATCGATG CGAAGGTGGC GGCGGGTTAT TTCTCCAGGT ACACGCCGCC CGACGCCAAG
GAACTCGCCC AGGCAAAGGG CAGGGGGTTG AAGGAATGA
 
Protein sequence
MSDHIVLTSH TRRDKPAEPI HWGAPTAAER GPVIASLTDP AQRNVIGTHA GAYAIYRALA 
VAAGSLQRAH RPDLTDTSPA EAIGPHPQWG DPDRIVSLDP WGHLVSTVFA DRIAAGVDIR
PTIAITRAHI NMPELMAAIS AGRLKPDGDI LEANGDVRVT KAAVDPVWYL PGIARRFNIK
ESVLRRSLFE QTGGMFPELV TRPDLKVFLP PIGGMTLYFF GDVTKLGQPD TRVACRVHDE
CNGSDVFGSD ICTCRPYLAH GIEVCIEMAQ QGGVGLVVYN RKEGRALGEV TKFLVYNARK
RQVGGDRAET YFERTECVAG VQDMRFQELM PDVFHWLGIR RIDRWASMSN MKHGALTAQG
IEVVEQVAIP ESLIPADARV EIDAKVAAGY FSRYTPPDAK ELAQAKGRGL KE