| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4568 |
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| Symbol | codA |
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| ID | 4041429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1181175 |
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| End bp | 1182455 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979989 |
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| Product | cytosine deaminase |
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| Protein accession | YP_586699 |
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| Protein GI | 94313490 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000171713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0375176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACA CCATCCTGCG CCACTGCAAT ATGCCTGACG GACGTACCGA TATCGATATC
GGCATTGCCA ACGGGCGGAT CGCGGCGGTG GAGCCACGGA TCGCGGCAAC GGCGGGCGAG
GAGATCGACG CTGCTGGACA GCTTGTCTCG CCGCCGTTCG TCGATGCGCA CTTCCATATG
GACTCCACGC TGTCATACGG CCTGCCGCGC GTGAACCAGT CCGGCACGCT GCTCGAGGGC
ATCGCGCTGT GGGGGGAGCT GAAGCCGCTG CTTACGCAGG ATGCCATCGT CGAGCGCGCG
CTGGCGTATT GCGACTGGGC CGTCTCCAAA GGGCTGCTGG CGATCCGTTC CCACGTGGAT
GTGTGCGATC CGCGCCTGCT GGCCACGGAG GCGCTGCTGC ACGTGCGTGA GCGCGTCAGG
CCCTACCTGG ATCTGCAACT CGTGGCATTT CCGCAGGACG GTCTGCTGCG CGCACCGGAT
GCGCTCAACA ACCTTCGCCG CGCGCTGGAC CTTGGCGTCG ATGTGGTGGG CGGCATTCCG
CATTTTGAGC GCACGATGGC CGACGGCGCG GCGTCGGTGA AGATGCTCTG CGAGGAAGCC
GCCGAGCGCG GGTTGCGCGT GGACATGCAT TGCGACGAAA GCGACGACCC GATGTCGCGC
CATATCGAGA CGCTGGCGAG CGAATCGGTA CGGCTGGGTT TGCAGGGACG CGTCACGGGT
TCGCATCTGA CGTCGATGCA TTCGATGGAC AATTACTACG TCTCCAAGCT GCTGCCGCTG
ATGCGAGAGG CCGGCGTATC GGCCATCGCC AATCCGCTGA TCAACATCAC GCTGCAGGGG
CGGCACGATA CCTATCCGAA GCGGCGCGGC ATGACGCGCG TGCCCGAGAT GCTTGCCGCC
GGCATTCCTG TGGCCTTCGG TCACGACTGT GTGATGGACC CCTGGTACAG CCTTGGCTCG
GGCGACATGC TAGAGGTGGC CCACATGGGT CTGCACGTCG CGCAGATGAC GGGGCAGGAC
GCCATGCGCG CGTGTTTCAC CGCTGTGACA GAAACGCCGG CACGTATCCT GGGTCTCGAA
GGCTATGGGA TCTCGCCGGG CCGCCGCGCG GATCTGGTGC TGCTGCAGGC GCGGGACCCG
GTGGAGGCGC TCCGCCTGCG CGCAACGCGG CTGCTGGTAA TGCGGGCAGG GAATGTCATC
GCCCGCACGG CGCCGGCCAC CGCAATGCTG GCGCTCGCGG GTCGACCGGC TCAAGTCGAC
TTCCAGTTAC ACCGGGCATG A
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| Protein sequence | MFDTILRHCN MPDGRTDIDI GIANGRIAAV EPRIAATAGE EIDAAGQLVS PPFVDAHFHM
DSTLSYGLPR VNQSGTLLEG IALWGELKPL LTQDAIVERA LAYCDWAVSK GLLAIRSHVD
VCDPRLLATE ALLHVRERVR PYLDLQLVAF PQDGLLRAPD ALNNLRRALD LGVDVVGGIP
HFERTMADGA ASVKMLCEEA AERGLRVDMH CDESDDPMSR HIETLASESV RLGLQGRVTG
SHLTSMHSMD NYYVSKLLPL MREAGVSAIA NPLINITLQG RHDTYPKRRG MTRVPEMLAA
GIPVAFGHDC VMDPWYSLGS GDMLEVAHMG LHVAQMTGQD AMRACFTAVT ETPARILGLE
GYGISPGRRA DLVLLQARDP VEALRLRATR LLVMRAGNVI ARTAPATAML ALAGRPAQVD
FQLHRA
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