| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4565 |
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| Symbol | |
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| ID | 4041424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1175242 |
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| End bp | 1177443 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979984 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_586696 |
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| Protein GI | 94313487 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.372815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.147883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACG GATTCTCCCC TCCGTATCCT TGCGGTCGAG CCAAAATAAG AGCATATCTG
GCCCACGTTG AATCCTCGGC GTGGGCCTAT CGACCGCAAG CAATGCAACG ACAAAAAAAA
TGGCGCCGCG CAGCGGCGCT TCCTGCCGCC GCACTGTCTG GTGTGGCCTT CGCCCAAACC
GTTCCGGCAA GCGTTCCTGC CGAGATTCCA ACCCTTCCTC CTGTCACCGC CACGGCTGCC
GCGGCGGGTT CGTTGACCGC CCCGGGCATC GCGCAGCAGC GCCAGTCATT GTTCCAGTCG
GCTGGATCCG TGGGCTTTGT TGATGCGGAC TCCTATAGCA ACACGTACGC CAGCGACCTG
CGCGATGTGC TCAAGGATGC ACCGGGTGTT TACGTACAGG AACGTTACGG CCAGGAGTTG
CGGCTGTCGA TCCGTGGCTC GGGAATTGCG CGCGGCTACC ACACGCGTGG CCTGGAAATC
CTGCAGGACG GCGTGCCGAC CAACTTTGCC GACGGCAGCG GCGACTTCTA CCAGATCGAT
CCGCTCGGTC TTTCGGCCGC CGAAGTCTAC AAGGGCGGCA ACGGGCTGGC GTATGGCAGC
ACCACCCTGG GCGGCGCCAT CAACTTCACT ACGCCCACCG CGCTGACCGC CGACGCGCCA
AACATGGTCC GCCTGGATGG GGGCAGTTTC GGCACCGTGC GCGGCAGTGG CCAGGTGTCA
CGGCAGATCG GCAACTGGGA CTTCCTGGTC AACGCCACGG TCAGCCATTC CGACGGCTAT
CGCAATCATG AACGCGGCCA GTACGAGCAG CTCAACGCCA ATGTCGGCTA CCGGTTCAGC
CCGGCGGTGG AGACGCGCTT CTACTTTGGC GCCTATATCG TCGATCAGTT GCTGCCCGGC
ACGCTCTCTC TGAACGATGC GCTGAACAAT CCGCGCATGG CATCGCCGAG CGCGCTGGCG
GGCGACCAGG CACGCAACAC GCGCACCGAG CGCCTGGCCA ATGTCACCAC CATCAAGCTC
GACAGCGGCC AGATCGACTT CACTACCTGG GCGATCCACA AGAGCCTGTA TCACCCGATC
TTCCAGGTGA TCGACCAGGA CTACTGGACC TATGGCTTCG CGCCCCGCTA CACGGGCGAA
TTCGCGCTTG GCGGCATGCG TAACCAGTTG ATCGCCGGGA TGCGATTCTT TGGCGGCAAC
AACGACGCGC GCCAGTACGT CAACGTCAAT GGCAATCGTG GCGCGCAGAC GCTGAATTCG
GCGCAGGATG CCTACAACTA CGAGCTCTAT CTCGAAGACC GCCTCTATGT GCTGCCCACC
GTGGCGCTGA TGGCTGGCGC CAAGGCGTAC CGCAACCGCC GCGAGTACAA GGACTATGGT
GGCCTGCCTA CCAATCCAAC GCCGAAGTCG GACGCCACGA GCTATAGCGG CGTGAATCCG
AAGTTTGGCG TGCTGTGGGA ACCAAAGAAG AACGTCCAGG CGTTCATCGA CATCACCCGT
AGCGCCGATG TCCCCGATTT CACGGACCTG AACCAGACGA TCGGCATGAC ACAGCAGTTC
GTGCCACTGG CCGCCCAGCA CGGCTGGACG CTGGAACTCG GCACGCGCGG CCAGCAGGAC
CGTTTCGGCT GGGATCTGAC GCTGTACCGC TCTCTGGTGC GCGACCAGCT GCTGCAGTAC
ACGGTCAGCC CCGACATCCC CGCGTCAACG TTCAACGCGA ACAAGACGAC CCTGCAAGGC
GTGGAGCTTG GCGCGAATGT AGACGTGCTA CGCAACGTGT TCGGCAGCAG CGACAAGGTC
AATGTGTCCC AACTCTGGAA CTACAGTGAC TTCCGCTTCG ACAACGATCC GGTCTATGGC
AACAACCGGA TCGCCGGGGT GCCGCAGCAC GTGCTGCGCA CGACGCTGGC CTATAGCCGA
AACTCGCGCC TGCGCGTGGC GGGCACAATC GACTGGGTGC CGACCGGTGC ATGGGTGGAC
TACGCCAACA CGCTCAAGGT GCCAAGCTAC GTGCTGTTCG GTATCGAGGC GAGCTACGAG
TTCGAGCGTG GCGTGACGCT GTTCCTCGAT GCCCGCAACC TGACGGACAA ACGCTATATC
AGCGATTTCA GCACCGTCAC GGATGCGCGG ACGGCCAATA CGTCGGTGTT CTATCCGGGC
AGCGGCCGCG CGTTCTACGC GGGGATCAAG TACAAGTTCT AA
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| Protein sequence | MAHGFSPPYP CGRAKIRAYL AHVESSAWAY RPQAMQRQKK WRRAAALPAA ALSGVAFAQT
VPASVPAEIP TLPPVTATAA AAGSLTAPGI AQQRQSLFQS AGSVGFVDAD SYSNTYASDL
RDVLKDAPGV YVQERYGQEL RLSIRGSGIA RGYHTRGLEI LQDGVPTNFA DGSGDFYQID
PLGLSAAEVY KGGNGLAYGS TTLGGAINFT TPTALTADAP NMVRLDGGSF GTVRGSGQVS
RQIGNWDFLV NATVSHSDGY RNHERGQYEQ LNANVGYRFS PAVETRFYFG AYIVDQLLPG
TLSLNDALNN PRMASPSALA GDQARNTRTE RLANVTTIKL DSGQIDFTTW AIHKSLYHPI
FQVIDQDYWT YGFAPRYTGE FALGGMRNQL IAGMRFFGGN NDARQYVNVN GNRGAQTLNS
AQDAYNYELY LEDRLYVLPT VALMAGAKAY RNRREYKDYG GLPTNPTPKS DATSYSGVNP
KFGVLWEPKK NVQAFIDITR SADVPDFTDL NQTIGMTQQF VPLAAQHGWT LELGTRGQQD
RFGWDLTLYR SLVRDQLLQY TVSPDIPAST FNANKTTLQG VELGANVDVL RNVFGSSDKV
NVSQLWNYSD FRFDNDPVYG NNRIAGVPQH VLRTTLAYSR NSRLRVAGTI DWVPTGAWVD
YANTLKVPSY VLFGIEASYE FERGVTLFLD ARNLTDKRYI SDFSTVTDAR TANTSVFYPG
SGRAFYAGIK YKF
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