Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4563 |
Symbol | |
ID | 4041422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1171754 |
End bp | 1172677 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979982 |
Product | LysR family transcriptional regulator |
Protein accession | YP_586694 |
Protein GI | 94313485 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000547874 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.177328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAG TCCGCCATTT CCGCTCGCTC GTGGCCATCG CCGAATCGGG CAAGCTGGCA ACGGCCGCTG AACGCGTGCA CGTGAGCCAG TCGGCGCTCT CCCATCAGAT CAAGGCCATC GAGGCGCACT ATGACATGCC GCTGTTCGAT CGCACGCGCC AGGGATTGCG TTTCACGCCC GCAGGGGAAC GCCTGCTGGC CCTGGCACGC GAGGCGTTGG CGGCGATCAG CGCGGCCGAG CGCGATCTGC TGCGCCTCAA GGGCGATACG CGCGGGGAGT TGCGCGTGGT ACTCGAATGC CACACCTGTT TCGACTGGCT GATGCCTGTG ATGGACGAGT TCCGTCGCCG CTGGCCCGAG GTGGAGGTGG ATCTGGTTGC CGGATTCCAC GCAGACCCGC TGGCACTGTT GAACAACGGC AAGGCGGATA TGGTGATCGG ATCGAAGCCG CCGGTAAAGC GGGGGCTGAC CGTGGCGCCG TTGTTCCGCT TCGAGATTCT GGCGGTGATG GCCAACGAGC ATCGGCTGCG CAGCAAGCGG CGCATCGAGG CACAGGACCT GGCGGGAGAA ACGCTGATTA CCTATCCCGT GCCGGAGCAG CGGATCGATC TGATCCGCGA GGTGCTGGAG CCGGCCGGTA TTCGTCTGCA GCGGCGCACC GCGGAGCTTA CGGTGGCGGT GCTGCAACTC GTGGCCAGCC GGCGTGGCGT CGCCGCGCTA CCGAACTGGG GCGTGAAGAA CTACGTCGAT CACGACTACG TGCTGGCCAA ACGCATCGGC ACGAAGGGGC TGTGGAGCGA GCTATACGCG ACGGTGCCGG CCGCCATCGC CGACCGGCCC TATGTGGACG ATTTCGTGTC GATCGTGCGC GATATCTGCG CGGCCGAACT CGACGGGATT GAACTGCTGG GGACGCCGGC CTAG
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Protein sequence | MIEVRHFRSL VAIAESGKLA TAAERVHVSQ SALSHQIKAI EAHYDMPLFD RTRQGLRFTP AGERLLALAR EALAAISAAE RDLLRLKGDT RGELRVVLEC HTCFDWLMPV MDEFRRRWPE VEVDLVAGFH ADPLALLNNG KADMVIGSKP PVKRGLTVAP LFRFEILAVM ANEHRLRSKR RIEAQDLAGE TLITYPVPEQ RIDLIREVLE PAGIRLQRRT AELTVAVLQL VASRRGVAAL PNWGVKNYVD HDYVLAKRIG TKGLWSELYA TVPAAIADRP YVDDFVSIVR DICAAELDGI ELLGTPA
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