Gene Rmet_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4563 
Symbol 
ID4041422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1171754 
End bp1172677 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID637979982 
ProductLysR family transcriptional regulator 
Protein accessionYP_586694 
Protein GI94313485 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000547874 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.177328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAG TCCGCCATTT CCGCTCGCTC GTGGCCATCG CCGAATCGGG CAAGCTGGCA 
ACGGCCGCTG AACGCGTGCA CGTGAGCCAG TCGGCGCTCT CCCATCAGAT CAAGGCCATC
GAGGCGCACT ATGACATGCC GCTGTTCGAT CGCACGCGCC AGGGATTGCG TTTCACGCCC
GCAGGGGAAC GCCTGCTGGC CCTGGCACGC GAGGCGTTGG CGGCGATCAG CGCGGCCGAG
CGCGATCTGC TGCGCCTCAA GGGCGATACG CGCGGGGAGT TGCGCGTGGT ACTCGAATGC
CACACCTGTT TCGACTGGCT GATGCCTGTG ATGGACGAGT TCCGTCGCCG CTGGCCCGAG
GTGGAGGTGG ATCTGGTTGC CGGATTCCAC GCAGACCCGC TGGCACTGTT GAACAACGGC
AAGGCGGATA TGGTGATCGG ATCGAAGCCG CCGGTAAAGC GGGGGCTGAC CGTGGCGCCG
TTGTTCCGCT TCGAGATTCT GGCGGTGATG GCCAACGAGC ATCGGCTGCG CAGCAAGCGG
CGCATCGAGG CACAGGACCT GGCGGGAGAA ACGCTGATTA CCTATCCCGT GCCGGAGCAG
CGGATCGATC TGATCCGCGA GGTGCTGGAG CCGGCCGGTA TTCGTCTGCA GCGGCGCACC
GCGGAGCTTA CGGTGGCGGT GCTGCAACTC GTGGCCAGCC GGCGTGGCGT CGCCGCGCTA
CCGAACTGGG GCGTGAAGAA CTACGTCGAT CACGACTACG TGCTGGCCAA ACGCATCGGC
ACGAAGGGGC TGTGGAGCGA GCTATACGCG ACGGTGCCGG CCGCCATCGC CGACCGGCCC
TATGTGGACG ATTTCGTGTC GATCGTGCGC GATATCTGCG CGGCCGAACT CGACGGGATT
GAACTGCTGG GGACGCCGGC CTAG
 
Protein sequence
MIEVRHFRSL VAIAESGKLA TAAERVHVSQ SALSHQIKAI EAHYDMPLFD RTRQGLRFTP 
AGERLLALAR EALAAISAAE RDLLRLKGDT RGELRVVLEC HTCFDWLMPV MDEFRRRWPE
VEVDLVAGFH ADPLALLNNG KADMVIGSKP PVKRGLTVAP LFRFEILAVM ANEHRLRSKR
RIEAQDLAGE TLITYPVPEQ RIDLIREVLE PAGIRLQRRT AELTVAVLQL VASRRGVAAL
PNWGVKNYVD HDYVLAKRIG TKGLWSELYA TVPAAIADRP YVDDFVSIVR DICAAELDGI
ELLGTPA