Gene Rmet_4549 details

Gene Information

• Locus tag: Rmet_4549
• Symbol: uvrA2
• ID: 4041408
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007974
• Strand: -
• Start bp: 1154918
• End bp: 1160797
• Gene Length: 5880 bp
• Protein Length: 1959 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637979971
• Product: excinuclease ABC subunit A
• Protein accession: YP_586683
• Protein GI: 94313474
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0178] Excinuclease ATPase subunit
• TIGRFAM ID: [TIGR00630] excinuclease ABC, A subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.179328
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTCGAG AGGACAAATT GTCAGATTCC GGCACCATTC GCATTCGCGG CGCCCGTCAG 
CACAACCTCA AGGACGTTGA TCTCGACTTG CACACGGGCC AGATGACCGT GGTGACCGGG 
CCGTCCGGTT CGGGAAAGTC GAGCCTGGTG TTCGACACGC TCTACGCCGA GGGCCAGCGT 
CGCTACGTCG AGACGTTCAG TGCCTATGCG CGCCAGTTCC TGGATCGCAT GGATCGGCCG 
CAGGTCGACA AGGTGGATGG TGTCCCGCCA GCTATCGCGA TCGACCAGAC GAACCCGGTG 
CGTAGCTCGC GGTCCACGGT CGGCACGATG ACCGAGCTCA ACGATCACCT GAAACTGCTG 
TTCGCGCGCG CGGCGGAACT GTTCGACCGG CAGACCGCGT TGCCGGTCCG GCATGACTCG 
CCAGAGACGA TTTATGCGGA ACTGGTGGCC CGGACGAGCG CGGGGCAGCC GTTTGCCGAT 
GCCCGGCTGG TGCTGACGTT CCCGGTCGAG CTGCCGGAAT CGGCCACCGA GGAAGAAGTC 
GCCCAATGGC TCTCGGTCAG CGGATACACC CGGGTGCACG GCCAGCGCGT GGTCGAATCG 
GCGACCGGAA ACCGCAAGGT GCTCGACGTG GTGGCGGACC GTTTCCGTAT TGGCAACGTT 
GAGAAGGCGC GGGCGCTCGA AGCCATCGAG GCCTCGCTCA AGCGTGGCAG CGGCCGTGTC 
AGCGTGCATG TGGTGACGGA CGAGGGTGAA GGGCCGGTCT GGAAGTTCTC GACCGGGCTG 
CATTGTCCGG AAAGCGATAT CCGCTATGCG GACCCGCAGC CGGCGCTGTT CTCGTTCAAT 
TCCGCCTATG GCGCGTGCGA TGCCTGCCGT GGATTCGGGC GCGTGATCGG TGTCGATCTG 
GGGCTGGTGA TTCCTGACGT CCGCAAGTCG CTGCGCGATG GGGCGATCAA GCCGATGCAG 
ACCCCCGCGT GGAAGGAGTG TCAGGACGAT CTGATGCGCT ACGCGGCCAA GGCCGGCATC 
CCGCGCGATC TGCCGTGGAA CCAGCTCAGC GAGGCCGAAC AGCACTGGGT GATCCACGGG 
TCCCCCGACT GGAACGGGCA GTGGAACAAG CAGTGGTACG GCGTGATGCG GTTCTTCAGC 
TACCTCGAGT CGAAGGCCTA CAAGATGCAT ATCCGCGTGT TGCTGTCGAA GTACCGCAGC 
TACACGCCTT GCGAGACCTG CGGCGGTGCC CGCCTGAAAA CCGAGGCGCT GCAGTGGCGC 
CTGGGGAGCG CCGGGAACGC CAACGCCGTG CTGCCGCCGG CGGACCGGTT CCTCCCGCGC 
GGCGTGGACT GGAGCCGCTC CCAACTGGAA GCGCTGCCCG GCCTGACCGT GCACGACCTG 
ATGCTGATGC CGATCGCGCG CATCCGCCGT TTCTTCGACG ACCTGACGCT GCCGTCGGCG 
CTGCTCGACG ATGCGCTCAA GCTGCTGCTG GCGGAGGTCC GCACACGGCT CAAATACCTG 
TGCGATGTGG GTCTGGGTTA TCTGACGCTG GACCGCCAGA GCCGCACGCT TTCGGGCGGG 
GAAGTGCAGC GGATCAACCT GACCACGGCG CTTGGCACGT CGCTCGTCAA TACGCTGTTC 
GTGCTCGACG AGCCCAGCAT CGGCTTGCAT CCGCGTGATC TGAACCGCAT CGTGGAGGCC 
ATGCATCGCC TGCGCGACGC CGGCAATACG CTGGTGGTGG TGGAGCATGA CCCGTCCGTG 
ATGCTGGCCG CGGATCGCCT GATCGACATG GGACCGGGGC CGGGCGAACG TGGCGGCACG 
ATCATCTTCG ACGGAACGCC GGAGGCCATC CGCAAGGAGC GGACCCTTAC CGGGGACTAC 
CTCGGCGGAC GCCGCCGCGT GACGGACACG TCGGACTGGC AATTGCGCCC GATCGACGCC 
GCCACGCCGC GCCTGCGGTT GGAAGGCGCG CGCGAGCATA ACCTCAAGGA CGTCACGGTC 
GAGATCCCGC TCAATCGCCT GGTCTGCGTG ACCGGTGTGT CGGGCTCGGG CAAATCGACG 
CTGCTGCAGG ACGTCCTGTA TCCGGCCATG GCACGCCATT TCGGCAAGGC TACCGAGTCG 
CCGGGCGTGT TTCGCGAACT GGTTGGCGCG GACCAGGTCG ATGACGTGGT CTTCGTCGAC 
CAGTCGCCGA TCGGCAAGAC CGCTCGCTCG AACCCGGCCA GCTACGTTGG CGCGTTCGAC 
GAGATCCGGA AGTTGTTTGC CAAGGCGCCG CTGGCACTGC AACGCGGCTA TACGGCTGGC 
ACCTTCAGTT TCAACTCTGG CGATGGCCGT TGCCCGACCT GTGGTGGTTC AGGGTTCGAG 
CATGTCGAGA TGCAGTTCCT CTCGGATGTC TACCTGCGTT GCCCCGATTG TGATGGCACG 
CGCTATCGCG CTGAGGCGCT GGAAGTCAAG ATCGAGCGCG CCGCGCGCGG TCAGGCGCCA 
CGCGCGCTGA GCGTGGCCGA CGTGCTGGAA CTGACGGTCA GCGAAGCCAC GGCCCTGTTC 
GAGAGCGATC CTGCCGTGTT GCGCGTGCTG GCGCCGATTG CGGACGTCGG CCTGGAATAC 
GTCAAGCTGG GGCAGCCCGT GCCGACACTG TCTGGCGGCG AGGCGCAGCG CCTCAAGCTG 
GCCGGCTTTC TGGCGGAGGC GGCGCAGGCC CAGCCGGTCA AGAACCGCAA GGCGGTGGTG 
TTGCCGAAGC GCCTGTTTAT GTTCGACGAG CCCACCACCG GGCTGCACTT CGACGATATC 
GCCAAGCTGA TGCGGGCTTT CGGCAAGCTG CTCGACGGCG GCCATTCACT GATCGTCATC 
GAGCACAACC TGGACGTGAT CCGTGCTTCG GACTGGATCG TCGATTTGGG TCCGGAAGGT 
GGCGACGCCG GCGGCGAGGT GGTCTGCGTG GGGACCCCGG ACGACGTCCG GGCGTGTGCC 
GAATCGCATA CCGGCCGCGC GCTGATCCAC TATGACGCGG CACTGGGCGA GGGCGGGACG 
TTGGCGGCGG AGCGCGCCGA GATCGCGGAA CATGGCCTGC CGCTGCAGGC GGCGGTGCAG 
GCCGCGCGGG CACGCCGCGC CATTGAGGGC GAAAACGTCG TGCGTATCGT GAATGCCCAC 
GAGCACAACC TCAAGTCGCT CAACGTCGAT ATCCCGCACG GCAAATTCAA TGTCATTACC 
GGGGTATCGG GTTCGGGCAA GTCGACGCTC GCGTTCGACA TCCTGTTCCA CGAAGGACAA 
CGCCGCTATC TGGAGTCCCT CAACGCCTAT GCGCGTTCGA TCGTGCAGCC GGCCGGGCGG 
CCCGAAGTGG ATGCGGTCTA TGGCATTCCG CCCACGGTGG CGATCGAGCA GCGTCTGTCG 
CGTGGCGGGC GCAAGAGTAC CGTGGCCACC ACGTCGGAGG TTTGGCACTT CCTGCGGCTG 
CTCTACGTCA AGCTCGGCAT CCAGCATTGC GTGCACGACG GCGCGCCCGT GACTTCGCAG 
AGTCCGGCAT CGATCGTCGC CCAGCTGATG CGCGATCATC GCGGCCAGCA CGTGGGTTTG 
CTGGCGCCGC TGGTGGTTAA CCGCAAGGGT GTCTATACCG ATCTGGCCAA GTGGGCCAAG 
GCACGTGGCA ACACGCATCT GCGCGTTGAT GGCGAGTTCC TGCCGGTCGA TCCGTGGCCA 
CGCCTGGACC GCTTCCGCGA GCACACGATT GAGTTACCGG TGGGCGATAT CGTCGTGTCG 
CCGGACAATG AGGCGGAACT GCGCGCGCTG CTGGAGCAGA CACTCGAACT CGGCAAGGGG 
GTCATGCATC TGCTGGCCCC GCTCGATGGA TTGCACGACG CGATGCAGGG AGGCAAGAAC 
ACCGGGCACG TGGGCGAAAC GAAGGTGTTT TCGACCAAGC GTGCCTGTCC GGTCTGCGGC 
ACAAGCTATC CGGAGCTTGA TCCCCGCATG TTCTCGTACA ACAGCAAGCA TGGCTGGTGC 
AACACGTGCG TGGGCACGGG TCTGGCGCTG ACACGCGAGC AGCGTGCCGC GTTTGACGAT 
ACCGTGCTCG GTGGCGATGA CCGTGGCCGT GAGCAGAGCC TGCCGTCGGA AGAGCAAGAG 
CCGGAGGGCG TGGGTGACGC GGCGTGTCCC GATTGCAGCG GGACGCGTCT CAATCCCGTG 
GCGCGTGCGG TAACGTTCGA TACCAATGCG ATTACCGATG TGGCGCAATG GACGGTGTCC 
GATACCCGTC GCTGGGTGGA CGGTTTGCGC CTGAAGGGGC GCGATGCCGA GATCGCGCGC 
GACGTGGTGA CGGAGATCGC CAGCCGCTTG CAGTTCCTGG AGGAGGTGGG GCTCGGTTAC 
CTGAGCCTGG ACCGTGCCGC GCCGAGCCTG TCTGGCGGCG AGGCCCAGCG TATCCGCCTG 
GCCGCGCAGC TCGGCAGCAA TCTGCAGGGC GTTTGCTACG TGCTCGATGA GCCGACGATC 
GGCCTGCATC CGCGCGACAA CCAGATTCTG CTCGATGCCT TGCGCAAGCT CGGCGACAAG 
GGCAATACGC TGGTGGTGGT GGAGCACGAC GAAGACACAA TCCGTCGCGC CGATCACATC 
ATCGACATCG GCCCGGGCGC AGGCAAGCGC GGTGGCAGCC TTGTGGCGCA GGGCGGCGTG 
GAAGCGCTGG CGGCGGCCAA GGATTCGACC ACCGGGCAGT TCCTGGCCCA TCCGATGATC 
CATCCGCTGC AGGCGCGCCG TCCGGTCACA CCCGCGCGCG CGGGCAAGCC CGCGGATCCG 
CCGCAATGGC TGACCGTCCA CGGTGCCAAC CTGCACAACC TGCGCGATGT CACCGCGCGG 
ATTCCGTTGA CGCGGTTGGT GACGATTACC GGGGTGTCCG GGTCCGGCAA GTCGACGCTG 
GCGCGTGATG TGCTGATGAC GAACCTGCTC GACGCCGTCG GGCGATCGGT GATGTCCTCG 
CCGGCCACGC GCCGCGCTCG GGCCGTGGCC GAGAAGGCCG GCAAGCCGAC GGCGACCAAG 
TCGCTCAGCG TGGAGCACGC GTGGCATGGC TGCGAGTCGA TCAGTGGCTG GGAATCGATC 
GACCGTGTGC TCGAAGTCGA TCAGACCCCG ATCGGCAAGA CGCCGCGCTC CTGTCCGGCG 
ACCTATATCG GTGTGTGGGA CGCCATCCGC AAGATGTTCG CGGAAACGCT CGAAGCCAAG 
GCGCGCGGTT ATAGCGCGTC GCGGTTCTCG TTCAATACCG GCGAGGGCCG CTGCCCGGCG 
TGCGAGGGCC AGGGCGTTCG GACGATCGGC ATGAGTTTCC TGCCGGACGT GAAGGTGCCA 
TGCGATGTCT GCCATGGGCA GCGATTCAAC CCGGAAACGC TGGCGGTGAC CTGGCGTGGC 
AAGAATATCG GCGAAGTGCT GACGATGGAG ATCGACGAGG CGGTGGAGTT TTTCTCGGCC 
ACCACGCAGA TCGCGCATCC GCTGCAACTG ATGAAGGATG TCGGGCTGGG CTACCTGACG 
CTGGGCCAGC CGTCGCCCAC GTTATCGGGC GGTGAGGCGC AGCGCATCAA GCTAGTCACC 
GAACTGTCGA AGGTCCGTGA CGACATCACG CGCCGCGGCC AGAAAGCGCC ACATACGCTG 
TATGTGCTAG ACGAACCGAC GGTGGGCCTG CATATGGCGG ACGTGGCGCG CCTGATCAAG 
GTGCTGCATC GCCTGACCGA TGGCGGGCAC AGCGTGGTGG TGATCGAGCA CGATCTTGAC 
GTGATCGCCG AGGCCGACTG GATTATCGAC CTCGGGCCGG AAGGTGGCGC GAATGGCGGC 
ACGATCGTTG GCGCGGCGGA TCCCGAGGCA TTGTCCCGCA TTCGGGCCAG CCACACCGGC 
GCGGCGCTGG TGCCGGTGCT GGCACGCGCT GCGCAGGGTA GCGAAAGGGC GACGGGCTGA 

 

Protein sequence

MIREDKLSDS GTIRIRGARQ HNLKDVDLDL HTGQMTVVTG PSGSGKSSLV FDTLYAEGQR 
RYVETFSAYA RQFLDRMDRP QVDKVDGVPP AIAIDQTNPV RSSRSTVGTM TELNDHLKLL 
FARAAELFDR QTALPVRHDS PETIYAELVA RTSAGQPFAD ARLVLTFPVE LPESATEEEV 
AQWLSVSGYT RVHGQRVVES ATGNRKVLDV VADRFRIGNV EKARALEAIE ASLKRGSGRV 
SVHVVTDEGE GPVWKFSTGL HCPESDIRYA DPQPALFSFN SAYGACDACR GFGRVIGVDL 
GLVIPDVRKS LRDGAIKPMQ TPAWKECQDD LMRYAAKAGI PRDLPWNQLS EAEQHWVIHG 
SPDWNGQWNK QWYGVMRFFS YLESKAYKMH IRVLLSKYRS YTPCETCGGA RLKTEALQWR 
LGSAGNANAV LPPADRFLPR GVDWSRSQLE ALPGLTVHDL MLMPIARIRR FFDDLTLPSA 
LLDDALKLLL AEVRTRLKYL CDVGLGYLTL DRQSRTLSGG EVQRINLTTA LGTSLVNTLF 
VLDEPSIGLH PRDLNRIVEA MHRLRDAGNT LVVVEHDPSV MLAADRLIDM GPGPGERGGT 
IIFDGTPEAI RKERTLTGDY LGGRRRVTDT SDWQLRPIDA ATPRLRLEGA REHNLKDVTV 
EIPLNRLVCV TGVSGSGKST LLQDVLYPAM ARHFGKATES PGVFRELVGA DQVDDVVFVD 
QSPIGKTARS NPASYVGAFD EIRKLFAKAP LALQRGYTAG TFSFNSGDGR CPTCGGSGFE 
HVEMQFLSDV YLRCPDCDGT RYRAEALEVK IERAARGQAP RALSVADVLE LTVSEATALF 
ESDPAVLRVL APIADVGLEY VKLGQPVPTL SGGEAQRLKL AGFLAEAAQA QPVKNRKAVV 
LPKRLFMFDE PTTGLHFDDI AKLMRAFGKL LDGGHSLIVI EHNLDVIRAS DWIVDLGPEG 
GDAGGEVVCV GTPDDVRACA ESHTGRALIH YDAALGEGGT LAAERAEIAE HGLPLQAAVQ 
AARARRAIEG ENVVRIVNAH EHNLKSLNVD IPHGKFNVIT GVSGSGKSTL AFDILFHEGQ 
RRYLESLNAY ARSIVQPAGR PEVDAVYGIP PTVAIEQRLS RGGRKSTVAT TSEVWHFLRL 
LYVKLGIQHC VHDGAPVTSQ SPASIVAQLM RDHRGQHVGL LAPLVVNRKG VYTDLAKWAK 
ARGNTHLRVD GEFLPVDPWP RLDRFREHTI ELPVGDIVVS PDNEAELRAL LEQTLELGKG 
VMHLLAPLDG LHDAMQGGKN TGHVGETKVF STKRACPVCG TSYPELDPRM FSYNSKHGWC 
NTCVGTGLAL TREQRAAFDD TVLGGDDRGR EQSLPSEEQE PEGVGDAACP DCSGTRLNPV 
ARAVTFDTNA ITDVAQWTVS DTRRWVDGLR LKGRDAEIAR DVVTEIASRL QFLEEVGLGY 
LSLDRAAPSL SGGEAQRIRL AAQLGSNLQG VCYVLDEPTI GLHPRDNQIL LDALRKLGDK 
GNTLVVVEHD EDTIRRADHI IDIGPGAGKR GGSLVAQGGV EALAAAKDST TGQFLAHPMI 
HPLQARRPVT PARAGKPADP PQWLTVHGAN LHNLRDVTAR IPLTRLVTIT GVSGSGKSTL 
ARDVLMTNLL DAVGRSVMSS PATRRARAVA EKAGKPTATK SLSVEHAWHG CESISGWESI 
DRVLEVDQTP IGKTPRSCPA TYIGVWDAIR KMFAETLEAK ARGYSASRFS FNTGEGRCPA 
CEGQGVRTIG MSFLPDVKVP CDVCHGQRFN PETLAVTWRG KNIGEVLTME IDEAVEFFSA 
TTQIAHPLQL MKDVGLGYLT LGQPSPTLSG GEAQRIKLVT ELSKVRDDIT RRGQKAPHTL 
YVLDEPTVGL HMADVARLIK VLHRLTDGGH SVVVIEHDLD VIAEADWIID LGPEGGANGG 
TIVGAADPEA LSRIRASHTG AALVPVLARA AQGSERATG