| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4544 |
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| Symbol | |
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| ID | 4041403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1150633 |
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| End bp | 1151397 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979966 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_586678 |
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| Protein GI | 94313469 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0504887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.311319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAG ACCACTCGCA GCCGTCGCAG GGGGAATCAC AAAAGGCCGC CATCGTTACC
GGCGCATCAC GCGGCATCGG CGCCGCCATT TCGGCGCGGC TGGCCCGCGA CGGCTTCGCG
GTCGTCATCA ACTATGCGAA CGGCGCGGAC ACCGCCGGGG ATCTGCGTCG CAAGCTCGAA
GCAAGTGGCG GCCGGGCCAT GACCTTCCAG GCCGATGTCA GCGATGCCAG CGCGGTGGCC
CGCATGTTCG ATGCAGCCGA GGCAACGTTC GACGGCGTCG ACGTTGTCGT CAACAACGCG
GGCGTGATGG TGCTCGACAC AATTGCAGCG TCTGACGACG CAGCATTCGA GCGCGTGATG
AACATCAATC TGAAAGGGGC TTTCCACACC ATGCGCGAGG CTGCCCGCCG CCTGCGCCAT
GGCGGCCGGA TCATCAATCT CTCGTCCAGC GTCATTGGTT TGCGCATGGA GCGCTATGGC
ATCTACGCGG CCTCGAAGGC GGCCGTGGAA GCGATGACCG CCGTATTGAG CAAGGAGATG
CGCGGCCGCG CCATTACCGT CAATGCGGTG GCACCCGGGC CGACCGCCAC CGACCTGTTC
CTCGACGGCA AATCACCTGA AACGATCGAA CGGCTCGCGA AGCTCAATCC GCTCGAACGA
CTGGGCACAC CTGAAGATAT AGCGGCAGCG GTGGCATTCC TGGCCAGCCC CGATGGAGCC
TGGATCAATG GCCAGGTGTT ACGCGCGAAT GGGGGAATGG TCTAG
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| Protein sequence | MTTDHSQPSQ GESQKAAIVT GASRGIGAAI SARLARDGFA VVINYANGAD TAGDLRRKLE
ASGGRAMTFQ ADVSDASAVA RMFDAAEATF DGVDVVVNNA GVMVLDTIAA SDDAAFERVM
NINLKGAFHT MREAARRLRH GGRIINLSSS VIGLRMERYG IYAASKAAVE AMTAVLSKEM
RGRAITVNAV APGPTATDLF LDGKSPETIE RLAKLNPLER LGTPEDIAAA VAFLASPDGA
WINGQVLRAN GGMV
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