| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4542 |
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| Symbol | |
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| ID | 4041401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1148049 |
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| End bp | 1149521 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979964 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_586676 |
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| Protein GI | 94313467 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.061139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.234222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGTTGC AACGAAATCG CCGTTTCCGA CACTCGCTCC CGTTCGACAC CGTGCAGAAC
AACGCCAGCC AGCCAGCCTC CGCCGCCGCG CCCCTCGACA CCCCGATGAC CGCGCGCGAG
AAGCGCGGCA TGGCCGCCAT CATGATCGCG GTCTCGCTGG CCACGCTCGA CACGGCGATC
GCGAATACGG CGCTGCCCAA TATCGCGGCC GACCTGAACA GCACGCCGGC CGCTTCCGTG
TGGATCATCA ACGCTTACCA GCTGGCCATG GTGGCGACGC TGCTGCCGTT CGCGGCGCTG
GGCGGCATTC TTGGCCATCG GCGGATCTAT CTCGCCGGCG TGGTGGTGTT TATCGTCTCG
TCGGTGATCT GCGCGATGGC GTGGTCGCTG CCATCGCTGG CCGCCGCTCG CGCGCTTCAG
GGCATCGGCG CCTCGGCGAT CATGAGCGTG AACACTGCCC TGATCAGCGC CATCTTTCCG
ATTCACCGCC TTGGCCGAGG TGTCGGGCTC AATGCGCTGG TGGTGGGGGT GTCCTTCGCG
GTCGGGCCCA CCGTGGCATC GGTCATCCTG TCGTTCGGAT CGTGGCCGTG GCTGTTCGCG
GTGAACCTGC CGATCGGGCT GCTTGCGCTG GCGATCGCCA ATCCGTCGCT GCCGAAGACC
AAGCGTAGCG ACCATGGTTT CGACCCGGTG GCGGCAATTC TTAACGTCAT CACGTTTGCC
TCACTGATCT TTGCATTGGG CGAAGGCGTC CAGCGCGCGC CGGCCGAATA CGTGGTGGCC
GCTGCCATCG TGTTCGTCAT TGCGTTCATA TTGCTGCTGC GCCGCGAGCG TGGTCACCCG
GCCCCGATGT TGCCGGTGGA TCTGTTCAAG CGGCCGATGT TCGCGCTCTC GACGCTGACG
GCAATCTGCT CGTTTGCGGC GCAAGGGCTG GCCTTTGTGT CGTTGCCGTT CTATTTCGAG
CATGTCCTGG GTCGCAGTCC GGTGGAAACC GGGTTCCTGC TCACGCCGTG GTCCGCCGTG
GTGGCGCTGA TGGCGCCGAT CGCGGGCCGC CTTTCGGATC GCTATCCGCC GGGGCTGCTC
GGCGGTATCG GTCTGGCGAT CATGTCCGTG GGCATGGCAT CGCTGGCGCT GATGCCGGCT
GACGCCAGCG TCCTCAATAT CGGTATCCGC ATGGCGATCT GTGGCGCTGG TTTTGGCTTC
TTCCAGTCAC CCAACCTCAA GGCGCTGATG GCAAGCGCGC CGCGCGAGCG TGCCGGCGGC
GCCAGCGGAG TGGTGGCCAC GGCACGGCTG CTTGGTCAGG CCACGGGCGC TGCGCTGGTG
GCGTTGTCGT ACAGCATTGC CGACAGCCAC GGCCCGACGC TTGCGCTGGC ACTCGGCGCA
GGATTCGCGG GTGCGGCGGC TGTTGCCAGT GGGCTGCGGC TGGTGACGCC GCAGAGTGCC
GATAGCGCCG CGATGCAAAC CGCCAGAAAG TAG
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| Protein sequence | MTLQRNRRFR HSLPFDTVQN NASQPASAAA PLDTPMTARE KRGMAAIMIA VSLATLDTAI
ANTALPNIAA DLNSTPAASV WIINAYQLAM VATLLPFAAL GGILGHRRIY LAGVVVFIVS
SVICAMAWSL PSLAAARALQ GIGASAIMSV NTALISAIFP IHRLGRGVGL NALVVGVSFA
VGPTVASVIL SFGSWPWLFA VNLPIGLLAL AIANPSLPKT KRSDHGFDPV AAILNVITFA
SLIFALGEGV QRAPAEYVVA AAIVFVIAFI LLLRRERGHP APMLPVDLFK RPMFALSTLT
AICSFAAQGL AFVSLPFYFE HVLGRSPVET GFLLTPWSAV VALMAPIAGR LSDRYPPGLL
GGIGLAIMSV GMASLALMPA DASVLNIGIR MAICGAGFGF FQSPNLKALM ASAPRERAGG
ASGVVATARL LGQATGAALV ALSYSIADSH GPTLALALGA GFAGAAAVAS GLRLVTPQSA
DSAAMQTARK
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