| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4522 |
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| Symbol | |
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| ID | 4041381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1127083 |
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| End bp | 1128024 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979944 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_586656 |
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| Protein GI | 94313447 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0983647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00465183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACAACA TCGGCTTCCT GCTGACGGAC GGTTTTCAGG TGATGGCGCT GGCGACGCAG
AGCGTCTTCG AGTACGCGAA TCTCGTGGCC GGCGAGCCTT TCTATCGCAT CAGGAATTAC
TCGATCGACG GTGGTCCGGT CGTGTCTTCG CTGGGGATGA CGGTAGAGAC GCACGCGGCA
AGCGCGCGCG TGGCCGTCGA TACCTGGGTG CTGGCCGGCG TTGGCGACCC AGTCGCGCAG
CCAACACCCG CACCGGTACT GGCGTTCGTG AGCAAGGCGG TGCCGCGCGC GCGCCGGACG
GCGTCGATTT GCACGGGGGC GTTCATTCTG GCGGAAGCCG GTCTGCTCGA TGGCCGACGC
GCGACCACGC ACTGGGCCTT CGCGCGCGAC ATGAAACGGC TCCATCCGGA CATCAAGGTA
GAGGACGATC GCATCTACAT CGTCGATGGC GCGATCTGGA CGTCGGCGGG CATGACGGCC
GGCCTGGATC TGGCGCTTGC CATGGTCGAA AAGGATCTGG GCGCGGACAT CGCGCGGTCG
GTCGCCCACA AGCTGGTGAT GCACCAGCGG CGCTCGGGTG GACAGTCACA GCACTCGGAG
CTACTGGATA TGGCGCCGAA ATCCGACCGT ATCCAGAGTG CGCTGGATTA CGCGCGCAAG
AACCTGAGCC AGGCACTGAC GGTGGAGGAA CTGGCGGAGA CGGTGCATCT GAGCCCACGC
CAGTTCAGCC GCGTGTTCAC CGCGGAGACC GGGCAGTCGC CGGCCAAGGC GATCGAGAAT
CTGAGGCTGG AAGCGGCGCG GCTGATGATC GAACAGAGTC GCCACCCGTT GGAAGTCGTG
GCGCGGGAGG CCGGCTTTCG AGACCGGCGC CATATGCGCG AGGCGTTCCT GCGGGGGTTC
GGCGTGCCGC CGCAGGCGGT GCGGCGGGAG GCCCGTGAGT AG
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| Protein sequence | MHNIGFLLTD GFQVMALATQ SVFEYANLVA GEPFYRIRNY SIDGGPVVSS LGMTVETHAA
SARVAVDTWV LAGVGDPVAQ PTPAPVLAFV SKAVPRARRT ASICTGAFIL AEAGLLDGRR
ATTHWAFARD MKRLHPDIKV EDDRIYIVDG AIWTSAGMTA GLDLALAMVE KDLGADIARS
VAHKLVMHQR RSGGQSQHSE LLDMAPKSDR IQSALDYARK NLSQALTVEE LAETVHLSPR
QFSRVFTAET GQSPAKAIEN LRLEAARLMI EQSRHPLEVV AREAGFRDRR HMREAFLRGF
GVPPQAVRRE ARE
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