| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4498 |
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| Symbol | fecR |
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| ID | 4041357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1099601 |
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| End bp | 1100587 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979920 |
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| Product | anti FecI sigma factor, regulatory protein iron uptake |
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| Protein accession | YP_586632 |
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| Protein GI | 94313423 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0023667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0499598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGTT CGCAAGCCGA TTTGCCGTCA GAAGTCATTG ATGCGGCCAT TGATTGGGCC
ATCCGCCTGC TGTTCAATGA ACCCAGCGAC GAGATGCGCC AGCGCTTTCT GGTCTGGGAG
GGCGCGGATC CCCGGCACCG GCTGGCATGG CAACGCATCC AATCACTACG CGATGGATTC
CCCCGTGTGC CGGCGACGCT GGCTGTGGAG ACGCTCCGCA ACGCCGAGAC CATTCGCGGC
CGCCGCCAGG CAGGGCGCCG CCAGGCGATC AAGTTGCTGG CTCTGGGTGG CGTATCGGCG
TTTGGGTTGT CCATGGCCTA TCGCGAATCG CCATGGAGAA GCTGGGCCGC CGACGTGCAT
ACCGGCGTGG GCGAGCAACG CAGGCTGGCG CTGGAAGATG GCACGGTCGT CGTGCTCAAC
ACCGAGACCG CCCTCGATAT TCGCTTCGAT GGCCAACATC GCGACGTGTT GCTTCGGCGT
GGCGAGATTC TGGTCACGAC TGGGCACGAC GGCGACGCAG CGCGGCCATT CCGTGTGCAA
ACGCCGTTCG GCGCGATGCG CGCGCTCGGA ACACGTTTCG CGGTGCGGCT CGAAGCGGAT
CGCGCGTGTG TCAGCGTGCA GCAGGGCGCG GTCGCGCTGC ACGACGGCAA AGCGCCATCG
CAAGCCGTTG CCACACCGGG CACGACCTGG ACGATGACGC AGGACACGAG CGCATTGAGC
GATGCCGCCG CGCTGTCGCC CGACAGCTGG GCCAACGGGC TGCTATCCGG CAGCAACATG
CGCCTGGCCG ACGTGCTTGC GGAGCTGGCC CGCTATCGCC ACGGGCGCAT CGATTGCGAT
CCCGCCGTGG CGGATCTGGT CATCTCGGGT GCGTACCGCA TCGACGATAC GGATCGCACG
CTGCGTTTTC TGGAGAAGGC GCTGCCAATC CGGGTGTCGT ACTTCACGCG CTACTGGGTT
CGCGTCGGGC CCAGGGTGCA TGCCTGA
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| Protein sequence | MSSSQADLPS EVIDAAIDWA IRLLFNEPSD EMRQRFLVWE GADPRHRLAW QRIQSLRDGF
PRVPATLAVE TLRNAETIRG RRQAGRRQAI KLLALGGVSA FGLSMAYRES PWRSWAADVH
TGVGEQRRLA LEDGTVVVLN TETALDIRFD GQHRDVLLRR GEILVTTGHD GDAARPFRVQ
TPFGAMRALG TRFAVRLEAD RACVSVQQGA VALHDGKAPS QAVATPGTTW TMTQDTSALS
DAAALSPDSW ANGLLSGSNM RLADVLAELA RYRHGRIDCD PAVADLVISG AYRIDDTDRT
LRFLEKALPI RVSYFTRYWV RVGPRVHA
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