Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4480 |
Symbol | amaB-3 |
ID | 4041339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1079810 |
End bp | 1081072 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979902 |
Product | N-carbamoyl-L-amino-acid hydrolase |
Protein accession | YP_586614 |
Protein GI | 94313405 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0132912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.010992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA CGCAAGCATC TGCCGGCATC GGACATGATG TGCGCATCAA CGGCTCCCGC CTGTGGGACA CGCTGATGCG CCTTGCCGAG ATTGGCGCGA CCCCCAAAGG GGGCGTCTGC CGTCTTGCAT TGACTGATCT GGACCGCCAG GGCAGGGATT TCTTCGTGAA GGAGGCCGAA GCGGCCGGCT GCACGATCCG CGTCGACGCC ATCGGCAATA TCTTTGCGCG CAGGCGTGGC CGCAACGACA GCCTGCCGGC CGTCATGACC GGAAGCCACA TCGACACCCA GCCGACAGGC GGCAAGTTCG ACGGGAACTA CGGCGTGTTC GCCGGCATCG AGGTCCTCAG GACGCTCAAC GACCGCGACA TTGTCACGGA GGCCCCGCTC GAAGTGGCAG TCTGGACGAA TGAAGAGGGA TCTCGGTTCG TGCCCGTGAT GATGGGATCT GGCGCGTTCA TCGGAGAATT CGTCCTCAAG GACTTGCTGG TGCAGACCGA CCGCGAGGGC ATCTCCGTCA AGGATGCCCT GGAGGCCATT AGCTATGCGG GCTCGGCACC GATTGGCGAA CCCCGGCCCG GCGCGTACTT CGAGGCTCAT ATCGAACAGG GGCCGGTGCT GGAGGCACAC GACACCGTGA TCGGCGTCGT GACTGGCGCA CTGGGGCAGC GCTGGTACGA CGTCACCATC ACGGGCATGG AAGCCCACGC GGGACCGACG CCGATGGCGC TACGCAAGGA CGCGCTGCTT GCCGCTTCGG AGTTGGTCGG CATCGTCAAC CGTATCGCGC TGGACCATCC GCCGCACGGG CGCGGTACCG TAGGCTGCCT GACGGTCCAT CCCGACTCCC GCAACGTGAT TCCCGGACGC GTCAACATGA CCGTCGATCT TCGCGCATCG GACGACGATC TATTGACCTC GATGCACGAC ACGTTCCTGG CCCAGACACG CGAACTGGCG GTACGTAACG GTGTCTCGAT CGATGTCAAG CAGGTTGTCT ACTTCCCGCC GCAGCCATTC GACGAGCGGC TGATCCGCGC CATTCGCGCG GGCGCCGGAC GGATCGGCCA TTCGGAGATG GACGTCATCA GCGGCGCTGG CCACGACGCC GTCTATCTCG CGCGCGTGGC CCCGACCGCT ATGATTTTTG TGCCTTGCAA GGACGGCATC AGCCACAACG AGATCGAGGA TGCGAAACCA GAGCATCTGG AGGCGGGGGC CAACGTGCTG CTTCATGCCA TGCTCGATGC GGCCAATCGG TAA
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Protein sequence | MSNTQASAGI GHDVRINGSR LWDTLMRLAE IGATPKGGVC RLALTDLDRQ GRDFFVKEAE AAGCTIRVDA IGNIFARRRG RNDSLPAVMT GSHIDTQPTG GKFDGNYGVF AGIEVLRTLN DRDIVTEAPL EVAVWTNEEG SRFVPVMMGS GAFIGEFVLK DLLVQTDREG ISVKDALEAI SYAGSAPIGE PRPGAYFEAH IEQGPVLEAH DTVIGVVTGA LGQRWYDVTI TGMEAHAGPT PMALRKDALL AASELVGIVN RIALDHPPHG RGTVGCLTVH PDSRNVIPGR VNMTVDLRAS DDDLLTSMHD TFLAQTRELA VRNGVSIDVK QVVYFPPQPF DERLIRAIRA GAGRIGHSEM DVISGAGHDA VYLARVAPTA MIFVPCKDGI SHNEIEDAKP EHLEAGANVL LHAMLDAANR
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