Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4477 |
Symbol | livM3 |
ID | 4041336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1077323 |
End bp | 1078321 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979899 |
Product | branched-chain amino acid inner-membrane translocator |
Protein accession | YP_586611 |
Protein GI | 94313402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0364038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0227687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCAA GCAGACAATG GTTGTTTCGC TACCGCTACT GGTGGCTAGC GCTGGGCGTC ACGCTGCTGC TCCCGTTGAC GATGCGTTCG GGCACGCTGG CGACCGAAGT CCTGATCTAT GGCATGGCTG CCATGGCCTG CAATCTTCTG CTCGGGTATA CGGGTCTGCT GTCGTTCGGC CAGGGGATCT TCTTTGGATT GGGAAGCTAT GCGGTTGGCC TGGCGCTGAC ACGTGCCGGC GGCCTGCCGA TGCCCGTGGC CCTGCTGGGT GCCGTGGTGA TCGGCGCGGC GACCGCAGCC CTGGTAGGGT GGTTCTCCAT CCGTCAACGC GGCACGTATT TCGTGATGCT GACGCTGGCG TTCGCGCAGA TGTTCTACTT CCTCGCCTAC ACGGCGCCCG GCATCACCGG CGGTGACAAC GGCTTGCTCG ACATCCCACG CCCCCCGATT TCCATCGGCG GGCATGCCCT GATCGATCTG ACGTCGTCGT GGGGATTCTA CGGATTCGTG GCGGTGCTGT TCCTGATCGT CTTCGCACTC GTTCTGCGCG TCACGGAATC CGTCCTCGGC CGCACGCTGC TGGCCATTCG CGACAACGAG GAACGGGCGC TTGCCGTCGG CTACAACACC CGGGCCTTCA AACTGCTGGC ATTCGTGATC TCCGGTGCCG TGACGGGGCT TGCCGGCGCC TTGCACGCCA TGCTGACAGG TATCGCGCCG CTGGCGAACA TCGACTACCA CGCGAGCGAA ATGATCCTGA TCATGACGGT GATCGGCGGC ACCAGCAATA TCTTCGCCTC GGTGCTCGGC GCGGCGTTCT ACGTCCTGCT GGCGGACTGG CTGTCCACAC TCTGGCCGCG CTGGCTCATG CTTCTGGGCT TCCTGCTTAT CGCGGTCAGC CTGTTCATGC AGCGCGGATT GTGGGGCCTG GGATCGACCA TCGCGGCACG CCTGCGAGGT GTGACGGGCG CCGCATCCAC CCAGGAGGAG CGCGCATGA
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Protein sequence | MASSRQWLFR YRYWWLALGV TLLLPLTMRS GTLATEVLIY GMAAMACNLL LGYTGLLSFG QGIFFGLGSY AVGLALTRAG GLPMPVALLG AVVIGAATAA LVGWFSIRQR GTYFVMLTLA FAQMFYFLAY TAPGITGGDN GLLDIPRPPI SIGGHALIDL TSSWGFYGFV AVLFLIVFAL VLRVTESVLG RTLLAIRDNE ERALAVGYNT RAFKLLAFVI SGAVTGLAGA LHAMLTGIAP LANIDYHASE MILIMTVIGG TSNIFASVLG AAFYVLLADW LSTLWPRWLM LLGFLLIAVS LFMQRGLWGL GSTIAARLRG VTGAASTQEE RA
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