| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4477 |
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| Symbol | livM3 |
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| ID | 4041336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1077323 |
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| End bp | 1078321 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979899 |
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| Product | branched-chain amino acid inner-membrane translocator |
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| Protein accession | YP_586611 |
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| Protein GI | 94313402 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0364038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0227687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAA GCAGACAATG GTTGTTTCGC TACCGCTACT GGTGGCTAGC GCTGGGCGTC
ACGCTGCTGC TCCCGTTGAC GATGCGTTCG GGCACGCTGG CGACCGAAGT CCTGATCTAT
GGCATGGCTG CCATGGCCTG CAATCTTCTG CTCGGGTATA CGGGTCTGCT GTCGTTCGGC
CAGGGGATCT TCTTTGGATT GGGAAGCTAT GCGGTTGGCC TGGCGCTGAC ACGTGCCGGC
GGCCTGCCGA TGCCCGTGGC CCTGCTGGGT GCCGTGGTGA TCGGCGCGGC GACCGCAGCC
CTGGTAGGGT GGTTCTCCAT CCGTCAACGC GGCACGTATT TCGTGATGCT GACGCTGGCG
TTCGCGCAGA TGTTCTACTT CCTCGCCTAC ACGGCGCCCG GCATCACCGG CGGTGACAAC
GGCTTGCTCG ACATCCCACG CCCCCCGATT TCCATCGGCG GGCATGCCCT GATCGATCTG
ACGTCGTCGT GGGGATTCTA CGGATTCGTG GCGGTGCTGT TCCTGATCGT CTTCGCACTC
GTTCTGCGCG TCACGGAATC CGTCCTCGGC CGCACGCTGC TGGCCATTCG CGACAACGAG
GAACGGGCGC TTGCCGTCGG CTACAACACC CGGGCCTTCA AACTGCTGGC ATTCGTGATC
TCCGGTGCCG TGACGGGGCT TGCCGGCGCC TTGCACGCCA TGCTGACAGG TATCGCGCCG
CTGGCGAACA TCGACTACCA CGCGAGCGAA ATGATCCTGA TCATGACGGT GATCGGCGGC
ACCAGCAATA TCTTCGCCTC GGTGCTCGGC GCGGCGTTCT ACGTCCTGCT GGCGGACTGG
CTGTCCACAC TCTGGCCGCG CTGGCTCATG CTTCTGGGCT TCCTGCTTAT CGCGGTCAGC
CTGTTCATGC AGCGCGGATT GTGGGGCCTG GGATCGACCA TCGCGGCACG CCTGCGAGGT
GTGACGGGCG CCGCATCCAC CCAGGAGGAG CGCGCATGA
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| Protein sequence | MASSRQWLFR YRYWWLALGV TLLLPLTMRS GTLATEVLIY GMAAMACNLL LGYTGLLSFG
QGIFFGLGSY AVGLALTRAG GLPMPVALLG AVVIGAATAA LVGWFSIRQR GTYFVMLTLA
FAQMFYFLAY TAPGITGGDN GLLDIPRPPI SIGGHALIDL TSSWGFYGFV AVLFLIVFAL
VLRVTESVLG RTLLAIRDNE ERALAVGYNT RAFKLLAFVI SGAVTGLAGA LHAMLTGIAP
LANIDYHASE MILIMTVIGG TSNIFASVLG AAFYVLLADW LSTLWPRWLM LLGFLLIAVS
LFMQRGLWGL GSTIAARLRG VTGAASTQEE RA
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