Gene Rmet_4475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4475 
Symbol 
ID4041334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1075183 
End bp1076361 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content62% 
IMG OID637979897 
Productbranched-chain amino acid ABC transporter periplasmic amino acid-binding protein 
Protein accessionYP_586609 
Protein GI94313400 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00447507 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGGCCGCCG TGTCGGCAGT CCCTGGCGTA GTGACCTATT CACGCAGTGT CCTGGCAGCC 
GGGGAGGCCA TCGAGCTCGG GTGTCCCGTG CCGATGTCCG GCGCGTTTGC GGCGAACGGG
AAGTTCGCGG ATCTCGGCAT GAAACTGGCC GTGGAGCAAT ATGGCAAGGT CCTGGGACGA
CCGTTGCAGT ACAGCGTCCT CGATACCGAG GGCAAGCCAG CCACGGCGGT CAGAAAGGTG
CAGGAGTTGG CGCAGCAGAA AGCCGCCCGC TACTTTGCCG GCGGCATCCT GTCCTCGGAG
TCGCTTGCCA TGGGCAAGGA AGCGGAGAAG CTTGGCGGCG TGTTCGTGAC GACCGCTGGC
GCCGACGAAA TCACCGGCAA GGACTGCAAC CGGGCCACGT TCCGCTGGTC CGTTCCCACC
TATGGCGCGA TCGAGCGCAC GGTGCGACCG CTGATCGAAG CGATGCCGAA GGCCAAGCGC
TGGTACACGA TCACCCCCCA GTATGTGTTT GGCGACGGAC TGCTTTCCGC AGCCAAGGCC
ATCTTCAAGG AAAAGGGCAT CGAGCACGTC GGCAACAGCT ATCACGCGCT AACGGAGAAG
GAATTCAGCG GCTACCTCAC CAACGCGATG GCCGCCAAGC CGGATGTGTT GCTGATCCTG
AACTTCGGCT CGCAGTCGTC GGACACCCTC CGGCAGGCCG TGAGCTTCGG CATGAAGAAG
AACTGCACCA TCCTCGTCGC CTGGGCGTCG GGTCTGGAAC AGTTCGAATC GCTCGGCGCC
GACCTCTGCG AAGGCGTCTA CTTCGGCGCG CAGTACTGGC ACGGCGTGGA CACACCCCTG
AACCGCGATC TGGTCAAGCG CGCCAATGAG AAGTTCAAGG CGAATCCGAA CTACAGCCTT
GCCGGCTCGT ATATCTGCAC GAAGATCCTG GTGGACGGCA TGATCAAGGC AGGCTCGGCC
GACCCGAAGG CCGTGGTGGC CGCGCTGGAA GGTCTGAAGT ACGAGGGCCT GACGGGTCCC
GAAGAGATCC GGGCCGGCGA CCATCAGGTA CTCAAGAACT ACTATCTGCT GAAGGGCAAA
GCCAAGTCCA AGATGAAGGA CAAGGATGAC TTTGCCGAGA TCGTGAGCGT CGGCAAGGCA
TTCCTGCCGC TCGATCAGAC GCAGTGCAAG ATGGCATAA
 
Protein sequence
MAAVSAVPGV VTYSRSVLAA GEAIELGCPV PMSGAFAANG KFADLGMKLA VEQYGKVLGR 
PLQYSVLDTE GKPATAVRKV QELAQQKAAR YFAGGILSSE SLAMGKEAEK LGGVFVTTAG
ADEITGKDCN RATFRWSVPT YGAIERTVRP LIEAMPKAKR WYTITPQYVF GDGLLSAAKA
IFKEKGIEHV GNSYHALTEK EFSGYLTNAM AAKPDVLLIL NFGSQSSDTL RQAVSFGMKK
NCTILVAWAS GLEQFESLGA DLCEGVYFGA QYWHGVDTPL NRDLVKRANE KFKANPNYSL
AGSYICTKIL VDGMIKAGSA DPKAVVAALE GLKYEGLTGP EEIRAGDHQV LKNYYLLKGK
AKSKMKDKDD FAEIVSVGKA FLPLDQTQCK MA