| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4468 |
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| Symbol | czcA2 |
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| ID | 4041327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1064352 |
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| End bp | 1067483 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979890 |
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| Product | heavy metal cation tricomponent efflux pump HmuA |
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| Protein accession | YP_586602 |
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| Protein GI | 94313393 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.186725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0193618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAC GTATTCTCCG CTTCGCCATC GCGCAGCGAT GGCTCGTGAT GCTGGCGGTC
CTCGGCATGG CCGGGCTCGG CATCTACAAC TACAGCCGCC TGCCGATCGA CGCCGTCCCG
GACATCACCA ATGTCCAGGT ACAGATCAAC ACTTCGGCGC CCGGTTACTC GCCGCTTGAA
ACCGAGCAGC GCGTCACCTA TCCGCTTGAG GTCACCATCG CCGGCCTGCC GGGCCTGGAG
CAGACCCGTT CGCTGTCGCG CTACGGCCTG TCCCAGATCA CGGTGATCTT CAAGGACGGC
ACGGATATCT ACTTCGCGCG CCAACTCGTC AACCAGCGCA TCCAGGAAGC CAAGGACAAG
CTCCCGGAAG GCGTGGTGCC TGCCATGGGC CCCATTTCCA CCGGCCTCGG CGAGATCTAC
CTGTGGACCG TCGAAGCCGA GCCGGATGCG CGCAAGCCGG ATGGCACGCC ATACACGCCC
ACCGACCTGC GGGAGATCCA GGACTGGGTC ATCAAGCCAC AGTTGCGCAA CGTGCCCGGC
GTTACCGAAA TCAACTCGAT CGGCGGCTTC GCCAAGGAAT ACCTGGTAGC GCCAAGCCCT
GAAAAGCTGG CCTCGTACGG CTTCTCGCTG CAGGACGTGG TGCAGGCGCT CGAACGCAAC
AACACCAATG TCGGCGCCGG CTATATCGAG CGGCGCGGCG AGCAGTACCT GGTGCGCGCG
CCCGGGCAGG TCAAGTCGAC CGACGACATC GGGGACGTCA TCGTGGGCAC CGCTCAAGGC
TTGCCGATCC GTGTCCGTGA TCTTGCCGAA GTGGACCTTG GCCGGGAGCT GCGCACCGGC
GCCGCCACCG ACAACGGCCG CGAAGTGGTA CTGGGTACGG TCTTCATGCT GATCGGCGAA
AACAGCCGCG CGGTATCCCA GGCCGTAGAT GCGCGCATGG CCGTGATCAA CAAGTCCTTG
CCGGCAGGCA TCAAGGCGGT CACCGTCTAC GATCGGACCA ATCTCGTCGA CAAGGCCATC
GCCACCGTCA AGAAGAACCT GCTCGAAGGC GCAGTGCTGG TGATCGCCAT CCTGTTCCTG
TTCCTCGGCA ACCTGCGCGC GGCGCTGATC ACCGCCATGG TGATCCCGCT GTCGATGCTG
TTCACGTTCA CCGGGATGGT GTCATACAAG ATCAGCGCGA ACCTGATGAG CCTGGGCGCG
CTCGACTTCG GCATCATCGT CGACGGCGCC GTGGTGATCG TCGAGAACTG CGTCCGCCGT
CTGGCTCATG CGAAAGAGCG CCTGGGACGC CCGCTGACAC GCGCCGAACG CTTCGAGGAA
GTGTTCGCGG CCGCGAGCGA GGCACGCCGG CCACTGGTTT ATGGCCAGCT CATCATCATG
ATCGTCTACA TCCCGATCTT TGCGTTGAGC GGAGTGGAGG GCAAGATGTT CCACCCGATG
GCGATGACCG TAGTGCTGGC ACTGATTGGC GCGCTGATCC TCTCCGTGAC TTTCGTGCCG
GCAGCCGTGG CGCTGTTTAT TGGCGGCGGC GTCGAGGAAA AGGAAAACCG CATCATGGGC
TGGGCTCGCC GCGGATACGA GCCGGTGCTC AAGCGCGCCC TGGCCAATAC GCCGGTGGTG
CTCGCTGGCG CGGGCATGGC GGTGCTGCTT AGCGGGCTGG TGGCGCTGCG CCTCGGGAGC
GAGTTCATCC CCAACCTGAA CGAAGGCGAT TTCTCGGTAC AGGCGCTGCG CATTCCGGGT
ACGAGTCTGA CGCAGTCGGT GGCGATGCAG CAGCAGATCG AAACGCGCCT CAAGGCAACC
TTCCCCGAGA TCGAGCGCAT TTTCGCGCGC ACGGGTACCG CGGAGATCGC ATCGGATCCG
ATGCCGCCCA ACATCTCGGA TGCCTACATC ATGCTGAAAC CACGCGACAA GTGGCCAGAT
CCCTCCCGTT CCCGCGAGTC GCTGCGCGCC GCGATCGAAG GCGAACTGGA GAAGATTCCG
GGCAATCGCT ACGAGTTCTC GCAGCCGATC CAGTTACGCT TCAACGAGCT GATTTCAGGC
GTGCGCAGTG ACGTGGCGGT CAAGCTGTTC GGCGACGATA ACGAGGTGCT TGATACCACG
GCGCAGCGCA TCGCCAAGGT CCTGCAGACC GTGTCCGGCG CCACAGAGGT CAAGGTCGAA
CAGACCACGG GTCTACCGGT GCTGACCGTC GACGTCGACC GCGCCCGCGC GGCACGCTAC
GGGCTGAACA TGATCGACGT TCAGGACACC GTCGCCATCG CCGTGGGCGG CCGCGACGCC
GGCGTGTTCT ACCAGGGCGA CCGCCGCTTC AACATTGGCG TGCGCCTGCC GGAAGGCATT
CGCGCCGACG TGGAAGCGCT GCGACGTCTG CCTATCCCCC TGCCCAAGGG CACCAACGCG
GCAACGAGCT ACATTCCGCT CGGCGAGGTC GCCACGCTGA CCATTGCGCC AGGTCCGAAC
CAGATCTCAC GGGAAAACGG CAAGCGCCGC ATCGTCATCA GCGCCAATGT GCGGGGACGG
GATCTCGGCA CGTTCGTCCC CGAAGCCGTG GCGGCCATCG ACGCGCGCGT GAAGATCCCC
ACCGGCTACT GGATTGCCTG GGGTGGCACA TTCGAGCAGT TGCAGTCGGC GACGGAACGG
CTCCAGATCG TCGTGCCCGT GGCGCTGCTG ATGGTATTCG TACTGCTGTT CGCCATGTTC
GGCAATGTGC GCGACGGGTT GATCGTCTTC ACCGGGATTC CGTTTGCATT GACCGGTGGC
GTCCTGGCCT TGTGGATGCG CGGTATTCCG TTGTCGATCT CCGCGGCGGT GGGCTTCATC
GCGCTCTCCG GTGTGGCGGT GCTCAACGGA CTGGTCATGC TCTCGTTTAT CCGCTCGCTG
CGTGAGGAAG GCCGATCGCT CGACGATGCC GTGTTCAACG GCGCGCTGAC GCGGCTGCGC
CCGGTGCTGA TGACGGCGCT CGTGGCATCG CTCGGATTCG TGCCGATGGC GATTGCCACG
GGCACCGGCG CAGAGGTGCA GCGGCCACTG GCCACGGTCG TGATCGGCGG GATATTGTCA
TCCACCGCGC TGACGCTGCT GGTACTACCG GTGCTGTATC GCTGGGCCCA CGGGCGATTG
GCGAGCCGCT GA
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| Protein sequence | MFERILRFAI AQRWLVMLAV LGMAGLGIYN YSRLPIDAVP DITNVQVQIN TSAPGYSPLE
TEQRVTYPLE VTIAGLPGLE QTRSLSRYGL SQITVIFKDG TDIYFARQLV NQRIQEAKDK
LPEGVVPAMG PISTGLGEIY LWTVEAEPDA RKPDGTPYTP TDLREIQDWV IKPQLRNVPG
VTEINSIGGF AKEYLVAPSP EKLASYGFSL QDVVQALERN NTNVGAGYIE RRGEQYLVRA
PGQVKSTDDI GDVIVGTAQG LPIRVRDLAE VDLGRELRTG AATDNGREVV LGTVFMLIGE
NSRAVSQAVD ARMAVINKSL PAGIKAVTVY DRTNLVDKAI ATVKKNLLEG AVLVIAILFL
FLGNLRAALI TAMVIPLSML FTFTGMVSYK ISANLMSLGA LDFGIIVDGA VVIVENCVRR
LAHAKERLGR PLTRAERFEE VFAAASEARR PLVYGQLIIM IVYIPIFALS GVEGKMFHPM
AMTVVLALIG ALILSVTFVP AAVALFIGGG VEEKENRIMG WARRGYEPVL KRALANTPVV
LAGAGMAVLL SGLVALRLGS EFIPNLNEGD FSVQALRIPG TSLTQSVAMQ QQIETRLKAT
FPEIERIFAR TGTAEIASDP MPPNISDAYI MLKPRDKWPD PSRSRESLRA AIEGELEKIP
GNRYEFSQPI QLRFNELISG VRSDVAVKLF GDDNEVLDTT AQRIAKVLQT VSGATEVKVE
QTTGLPVLTV DVDRARAARY GLNMIDVQDT VAIAVGGRDA GVFYQGDRRF NIGVRLPEGI
RADVEALRRL PIPLPKGTNA ATSYIPLGEV ATLTIAPGPN QISRENGKRR IVISANVRGR
DLGTFVPEAV AAIDARVKIP TGYWIAWGGT FEQLQSATER LQIVVPVALL MVFVLLFAMF
GNVRDGLIVF TGIPFALTGG VLALWMRGIP LSISAAVGFI ALSGVAVLNG LVMLSFIRSL
REEGRSLDDA VFNGALTRLR PVLMTALVAS LGFVPMAIAT GTGAEVQRPL ATVVIGGILS
STALTLLVLP VLYRWAHGRL ASR
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