Gene Rmet_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4466 
SymbolczcS2 
ID4041325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1062336 
End bp1063778 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content66% 
IMG OID637979888 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_586600 
Protein GI94313391 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.785894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0279336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGC TGTCGAAGCT GCAGGCCGCA ATGCCGGCAT CGCTTACCAC GCGGCTGGCG 
CTGGCCTATG GGCTGACCAC GGCGGCGGTG CTGGTTGGCG TGGCAACGTA TCTGTCGAGT
TCGCTGGGTA ACCAGTTGCA GGCGCGCGAT GAAGGCGAGC TGGTAGGCGA GGTGCTGCTG
GTGCGGCATC TGCTGCGTGA AGTTGGCAGT GAGGCCGAAA TTCGCGCGGA CACACACCGA
TTTGCCGATA TCGCCATGGG GCACGAAGGG CTGGTGCTCG TGGTCCGCAC GTTGGGCGGC
GATCCGCTGG TCACGCTCAA CCCGCGTAAT GAACGGGTTC CAGATCTGCG CGTGCTGCCG
CTCGCCACGG CGCCCGATAC GACCCAATTG CAGACCTGGT ATCCACGCAA TGGCGTGCCG
TCACGCGGCA TCGTCGCGTT GGGCCAGATT GGCGACTCCG GTCAGACTGT GGAGATCGTC
GTGCTCAGCG ATGCGGGCTA TCGCGTGGCG CTGATGCGCG AGTATCACAG CCGGTTGCTC
GTGGCGGTGC TGTGCGGTGC GATCGTGGCG GCGGCCCTCG GTTTCCTGCT GGCACGGCGT
GGCTTGCGGC CCTTGCGGCG GATGGCGAGC GATGCGGCGG CCGTGACCAC GAGCCGACTG
GCGACGCGCC TCGACGTAGG CAGCGCACCG GAGGAATTGC GCGATCTGGC GGGCGCGTTC
AACGGTATGC TCGCGCGCCT GCAGGACAGC TTCACGCGGC TTTCCACGTT CTCGGCCGAT
CTGGCGCACG ACTTCCGCAC GCCGATCAGT AACCTCGTGG GCCAGACGCA GGTCACGCTG
GCCCAGCGAC GCACGGCGGC GGAGTATGAA TCGTTGCTTG AGTCGAATCT CGAGGAGTAC
GAGCGCTTGT CGCGCATGAT CGAAAACATG CTGTTCCTGG CGCGCGCCGA CAACGCACAG
GTTGCACTCG GGGCGCGGCC ACTCGATGCG CGGGCGGAAC TGGACAAGGT GGCGGAGTAT
TTCGAAGCTG TGGCCGCCGA CCGCGACCTG ACGCTGTCCG TCACCGGCGC GGCCACGGTG
ACTGCGGACC AGCCGTTGCT GCGGCGCGCC ATCATCAATC TGCTGGACAA CGCGCTGCGT
CACGCGCCTG CGGGCAGTAC GGTGCAATTG GCCGTGTCAC GTGGACAGCC CGGCCATACC
GCCATCAGCG TGGTGAACGG CGGCCCCGGG ATCACGCCGG AGGCGCTGCC GCACCTTTTC
GCACGCTTCT ATCGCGGCGA TCCGTCACGT CGCGACTCGG CCAAATCCAC CGGCCTCGGC
CTTGCCATTG TCGACACCAT CATGCGGCTG CATGGCGGCA GCGTGTCCGT GCGCAGCGTG
GACGGACAAA CCACGTTCGA ACTCGACTTT CCTGACAAAG CTGTCAGTAG GGCAGGCGCA
TAA
 
Protein sequence
MRLLSKLQAA MPASLTTRLA LAYGLTTAAV LVGVATYLSS SLGNQLQARD EGELVGEVLL 
VRHLLREVGS EAEIRADTHR FADIAMGHEG LVLVVRTLGG DPLVTLNPRN ERVPDLRVLP
LATAPDTTQL QTWYPRNGVP SRGIVALGQI GDSGQTVEIV VLSDAGYRVA LMREYHSRLL
VAVLCGAIVA AALGFLLARR GLRPLRRMAS DAAAVTTSRL ATRLDVGSAP EELRDLAGAF
NGMLARLQDS FTRLSTFSAD LAHDFRTPIS NLVGQTQVTL AQRRTAAEYE SLLESNLEEY
ERLSRMIENM LFLARADNAQ VALGARPLDA RAELDKVAEY FEAVAADRDL TLSVTGAATV
TADQPLLRRA IINLLDNALR HAPAGSTVQL AVSRGQPGHT AISVVNGGPG ITPEALPHLF
ARFYRGDPSR RDSAKSTGLG LAIVDTIMRL HGGSVSVRSV DGQTTFELDF PDKAVSRAGA