| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4428 |
|---|
| Symbol | |
|---|
| ID | 4041287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1022843 |
|---|
| End bp | 1023904 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979850 |
|---|
| Product | MaoC-like dehydratase |
|---|
| Protein accession | YP_586562 |
|---|
| Protein GI | 94313353 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000912806 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.477783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACATGG AGAAGTGCCG CAGCGGTAAC TATTTCGAGG ACTTCCGGGT CGGCATGAAG
ATCAGGCATG CCACGCCGCG CACGCTGACC GAAGGCGACC GGAGTCTGTA CATCGGCCTG
ACCGGCAGTC GGGCGGCGCT GTGCACGGCC GAGACCAACG CACGCGATCT GGGGATGGAG
CGACGGCCGC TGGAAGACCT GCTGGTGTTC AACACGGCGT TCGGCAAGAC CGTGCCGGAT
ATCTCGCTCA ATGCGGTGGC CAACCTGGGC TATGCGGAAG TGCGCTTTCT CGCCCACGTG
TATCCGGGTG ACACGCTGGC GGTGGAATCC GAGGTTATCG GCCTGAAGGA GAACACCAGC
GGGAAGAGCG GCGTGGTCTA CGTGCGATCC ATGGCGCGTA ACCAGCACGG CCGCGAGGTG
CTGAGCTGGG TGCGCTGGGT GATGGTGCAC AAGCGGGACC ACGGTGCGGC GTGCGCAGAA
GCGGTGGTGC CAGCCACGCA GGCTGTGGTG CCGAGTGCAT GGATGCGTCG CGACGACTAC
ACCGCGCGCG TTCGCGAGAT CACGGCGATG ACCGGCTTTG CGGACCTGTG GGACGACTAC
GCAGTGGGCG AGCGCATCGA GCACCCGGGC GCGATGACGA TCAACGACAG CGACCACAGC
ATCGCCACGC GCCTGTACCA GAACACGGCC CGCGCGCACT TCGACGGTCA TGCCATGGCG
GCCGGCGGTG GACGGCGGTT GGTCTATGGT GGCCACATCA TTTCGGTATG CCGCGCGCTG
TCGTACGACG GACTGGAGAA CGCGCTGTCG ATTCTCGCCA TCAACGGCGG CAGCCACGTG
AATCCGACCT ATGCTGGCGA CACCATTGCC TGCGCGACGC AGGTGATCGA GAAGCTCGAC
CTGGGGCAGG GCCATCTCGG CGGGCTGCGG CTGCGCATGA TCGGCGTGAA GAACGTCAGC
GCGGCATCCA TCGCGTTCCC CGCGCCCGGC GAGAGCCGGA CCGCGCATCC ATCCAGCGTG
GTGCTGGACC TGGACTACAC CATCGCCATC CCAAGGCGGT AA
|
|---|
| Protein sequence | MDMEKCRSGN YFEDFRVGMK IRHATPRTLT EGDRSLYIGL TGSRAALCTA ETNARDLGME
RRPLEDLLVF NTAFGKTVPD ISLNAVANLG YAEVRFLAHV YPGDTLAVES EVIGLKENTS
GKSGVVYVRS MARNQHGREV LSWVRWVMVH KRDHGAACAE AVVPATQAVV PSAWMRRDDY
TARVREITAM TGFADLWDDY AVGERIEHPG AMTINDSDHS IATRLYQNTA RAHFDGHAMA
AGGGRRLVYG GHIISVCRAL SYDGLENALS ILAINGGSHV NPTYAGDTIA CATQVIEKLD
LGQGHLGGLR LRMIGVKNVS AASIAFPAPG ESRTAHPSSV VLDLDYTIAI PRR
|
|---|
| |