| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4420 |
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| Symbol | caiB |
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| ID | 4041279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1015300 |
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| End bp | 1016541 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979842 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_586554 |
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| Protein GI | 94313345 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00966775 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.217151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCC ACGCAGACAC CCAGACCCAT CCCCCCGGCG CCCTTGCCGG CCTGCGCGTG
GTCGACCTCA CGCAGATGCT CGCCGGACCG TTCTGCACCC AGGTGCTGGC CGATCACGGC
GCGGACGTGA TCAAGGTGGA AGCGATGACC GGTGATGGCA CCCGCATCAC CGGCCCCTTC
TGTGACGACG ACACGCTGCG CGAATTCGGC GGCTACTTCC AGAGCGTCAA TCGCAACAAG
CGGTCGATCG CGGTGGACCT CAAGAGCAGC ACTGGGCGCG AGATCCTGCG CAAGCTGATA
GACAGCGCCG ACGTCGTGGT CGAGAACTTT CGCGCCGGCG TCATGGAGCG CCTTGGCCTG
TCCTACGAAA CCCTGCGCGA AACCAATCCG CGTCTGGTCT ATGGCACGGT ACGCGGCTTC
GGCGACCCAC GCAGCGGCGA AAGCCCCTAC GCGCAGTGGC CTGCCTACGA CGTCGTGTCG
CAGGCGATGG GCGGCATGAT GGGCATCACC GGCCCCGACC GGGACACTGC TACGAAGATC
GGCCCGGGCG TCGGCGATAC GATACCTGCG CTGATGCTCT GCATTGGCAT TCTCTCCGCC
GTGCACCGCG CGCGCGGCAC CGGGCACGGT CAGTTCGTCG ATGTGGCCAT GACCGATGCG
GTACTGGCCA TGTGCGAGCG CATCGTCTAC CAGACGTCCT ACACCGGCGT GGTACCAGCG
CCCGAAGGCA ACCGCCACCC GTTGCTCTGC CCCTTCGGCC TGTTCCGCTC GCGCGACGGC
CAGGTCTCGA TTGCCTGCGC CACCGATGCA TTCTGGGAAA AGCTGGCCAT CGCCATCGGC
CGCCCGGACA TGGCCACCGA CGAGGCGTTC GCCACCAATG CAGCCCGCGT GCAGCACCAG
CAGCAGGTCA TCGACGCGAT CGAAGCATTC ACCACCGTGC GCACAAAGGA AGAGATCGCT
GCCGTTCTCG GCGGCAAGGT GCCGTTCGGC CCGGTCTACA CCGCCGCGGA GATCTTTGCT
GACCCGCACT ACGCGGTGCG CGAGATGCTG GTCGAAGTCG AACAGCCCGG CTCGGCCAGA
CCGGTGAAGA TCGCCGGCGT GCCCATCAAG CTGAGCGACA CCCCTGGCGC GGTACGTCGG
CGCGCGCCGC TGCTGGGCGA GCACACCGAG GAAATCCTGC TGGCCACCGG CTACACCGAA
CGGGACATCA AGGGCCTGCG GGAGACAAAA GCCGTTCGCT AG
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| Protein sequence | MQTHADTQTH PPGALAGLRV VDLTQMLAGP FCTQVLADHG ADVIKVEAMT GDGTRITGPF
CDDDTLREFG GYFQSVNRNK RSIAVDLKSS TGREILRKLI DSADVVVENF RAGVMERLGL
SYETLRETNP RLVYGTVRGF GDPRSGESPY AQWPAYDVVS QAMGGMMGIT GPDRDTATKI
GPGVGDTIPA LMLCIGILSA VHRARGTGHG QFVDVAMTDA VLAMCERIVY QTSYTGVVPA
PEGNRHPLLC PFGLFRSRDG QVSIACATDA FWEKLAIAIG RPDMATDEAF ATNAARVQHQ
QQVIDAIEAF TTVRTKEEIA AVLGGKVPFG PVYTAAEIFA DPHYAVREML VEVEQPGSAR
PVKIAGVPIK LSDTPGAVRR RAPLLGEHTE EILLATGYTE RDIKGLRETK AVR
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