Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4402 |
Symbol | |
ID | 4041260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 997723 |
End bp | 998643 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979823 |
Product | transmembrane protein |
Protein accession | YP_586536 |
Protein GI | 94313327 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0849881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.180606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAC GCCCGACGTA TGAGGTACCC GCCGCAACGC CGGGCGCCAC ACCGAACACG CAGTGGCTGC GCGTAGCGCC CGCGCTATTC CTGCTGCTCT GGTCCGGCGG ATTCGTCTTT CTGAAGCTCG GCCTGCGCCA CGCCGATCCG CTGACCTTTC TGGCGTTGCG CTATGCATGC GTGGTCGGCC TGCTGATCGT CCCCTGCCTC TGGATCCGCC CTGCGTTCCC GCCGGGCATC AAGCCCTGGC TGCATCTGGG CATGGTGGGC CTGCTGATTC AGGCCGGCTA TTTCTCGTTC ACCTATCTGA GTCTCAAACA CGGCATGTCG GCCGGCGCGG TTGCGCTCGT CACGTCACAG CAACCGATCC TGATCGGGCT GCTCGCGCCA GCCATCGCCG GCGAACGCGT GGACCGGGTG CGATGGCTTG GGCTGGCACT TGGCGTAACG GGCGCGGTGA TCGTCATCAC ATCCCGATCG TCCATCGACG TGGCCACCCC TGCCGGGCTG ATATTCGCCT TGCTCGCGCT GTTGGCGATG ACAGGTGGCA CGTTGTGGGA AAAGCGCTTC GGCACGACCG TGCATCCGGT GGCCTCGAAT CTCGTGCAGT ACGCCGTCGG GCTGGTCGTC ACCGCGCCGC TGGCCTATGC GCTCGAACCG ATGCATGTGG CATGGACGCC GGAGCTGTTC GGATCGCTGG CCTACCTGGT GATTGGCAAT TCGATCATCG CCATTTCGCT GCTGCTGGCG ATGATCCGGC ATGGCGAGGC CTCGCGGGTA TCGGCGCTGT TCTTCCTCGT GCCACCGATG ACGGCGGTGG TCGCCTTCGC GGTGCTTGGC GAGTCGATTC CGCTCGCGGC ATGGCCGGGG ATGGCCATGG CCGCAATCGG GCTCTATCTG GTAATGGGCA GGCGGAGTTG A
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Protein sequence | MSERPTYEVP AATPGATPNT QWLRVAPALF LLLWSGGFVF LKLGLRHADP LTFLALRYAC VVGLLIVPCL WIRPAFPPGI KPWLHLGMVG LLIQAGYFSF TYLSLKHGMS AGAVALVTSQ QPILIGLLAP AIAGERVDRV RWLGLALGVT GAVIVITSRS SIDVATPAGL IFALLALLAM TGGTLWEKRF GTTVHPVASN LVQYAVGLVV TAPLAYALEP MHVAWTPELF GSLAYLVIGN SIIAISLLLA MIRHGEASRV SALFFLVPPM TAVVAFAVLG ESIPLAAWPG MAMAAIGLYL VMGRRS
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