Gene Rmet_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4402 
Symbol 
ID4041260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp997723 
End bp998643 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content65% 
IMG OID637979823 
Producttransmembrane protein 
Protein accessionYP_586536 
Protein GI94313327 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0849881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.180606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC GCCCGACGTA TGAGGTACCC GCCGCAACGC CGGGCGCCAC ACCGAACACG 
CAGTGGCTGC GCGTAGCGCC CGCGCTATTC CTGCTGCTCT GGTCCGGCGG ATTCGTCTTT
CTGAAGCTCG GCCTGCGCCA CGCCGATCCG CTGACCTTTC TGGCGTTGCG CTATGCATGC
GTGGTCGGCC TGCTGATCGT CCCCTGCCTC TGGATCCGCC CTGCGTTCCC GCCGGGCATC
AAGCCCTGGC TGCATCTGGG CATGGTGGGC CTGCTGATTC AGGCCGGCTA TTTCTCGTTC
ACCTATCTGA GTCTCAAACA CGGCATGTCG GCCGGCGCGG TTGCGCTCGT CACGTCACAG
CAACCGATCC TGATCGGGCT GCTCGCGCCA GCCATCGCCG GCGAACGCGT GGACCGGGTG
CGATGGCTTG GGCTGGCACT TGGCGTAACG GGCGCGGTGA TCGTCATCAC ATCCCGATCG
TCCATCGACG TGGCCACCCC TGCCGGGCTG ATATTCGCCT TGCTCGCGCT GTTGGCGATG
ACAGGTGGCA CGTTGTGGGA AAAGCGCTTC GGCACGACCG TGCATCCGGT GGCCTCGAAT
CTCGTGCAGT ACGCCGTCGG GCTGGTCGTC ACCGCGCCGC TGGCCTATGC GCTCGAACCG
ATGCATGTGG CATGGACGCC GGAGCTGTTC GGATCGCTGG CCTACCTGGT GATTGGCAAT
TCGATCATCG CCATTTCGCT GCTGCTGGCG ATGATCCGGC ATGGCGAGGC CTCGCGGGTA
TCGGCGCTGT TCTTCCTCGT GCCACCGATG ACGGCGGTGG TCGCCTTCGC GGTGCTTGGC
GAGTCGATTC CGCTCGCGGC ATGGCCGGGG ATGGCCATGG CCGCAATCGG GCTCTATCTG
GTAATGGGCA GGCGGAGTTG A
 
Protein sequence
MSERPTYEVP AATPGATPNT QWLRVAPALF LLLWSGGFVF LKLGLRHADP LTFLALRYAC 
VVGLLIVPCL WIRPAFPPGI KPWLHLGMVG LLIQAGYFSF TYLSLKHGMS AGAVALVTSQ
QPILIGLLAP AIAGERVDRV RWLGLALGVT GAVIVITSRS SIDVATPAGL IFALLALLAM
TGGTLWEKRF GTTVHPVASN LVQYAVGLVV TAPLAYALEP MHVAWTPELF GSLAYLVIGN
SIIAISLLLA MIRHGEASRV SALFFLVPPM TAVVAFAVLG ESIPLAAWPG MAMAAIGLYL
VMGRRS