Gene Rmet_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4399 
SymbolpotG 
ID4041257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp995573 
End bp996667 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID637979820 
Productspermidine/putrescine ABC transporter ATP-binding subunit 
Protein accessionYP_586533 
Protein GI94313324 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.15409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.279187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC TGCAAGTTCA TCACCTGTCC AAGTCTTTCG GCGGCCGGCC GGTCCTCGAC 
GATATCGGCT TCAATGTCGG ATCGGGGCAA TTCTTCACGC TCGTGGGGCC TTCGGGATGC
GGCAAGACCA CCCTGCTGCG GCTGCTCGGC GGTTTCTCCG AGCCCGATAG CGGCGAGGTA
CTGTTCGATG GCAAGAGCCT TCAGGGCGTG CCACCCGAGC ATCGCCCCAT GCACACGGTC
TTCCAGAGCT ACGCGCTTTT CCCGCACATG ACCGTGGCCG CCAATATCGC TTTTCCGCTG
CGGATGCAGA AGTTACCGCG CCACGAAATC GACGGGCGCC TGGGCAGCCT GATCGAAAAC
GTCCGTCTGC AAGGCTTCGA GCGCTACTAC CCGCACGAGC TTTCCGGCGG ACAGCGTCAA
CGCGTGGCCA TCGCCAGAGC ACTGGCCGCG CGTCCCCGGC TACTCCTGCT CGACGAACCG
CTGTCCGCGC TCGATGCGGC GCTGCAAACC CAGATGCTTC ATGAGTTGAT CGCGTTGCAG
CAGCAACTGG GCGTGGCGTT CATCTACGTC ACGCACGATC AGACCCACGC ACTGGCGCTC
TCGCAACGCA TCGCGGTGAT GCATGAAGGC CACATCGTCC AGCTCGACAC ACCCGAAGCG
ATCTACCGCG CACCGGCCAC GACATTCGTG GCCGGATTCA TCGGGTCCTG CAATCTGCTG
GATGCCACCG TCGCGGAATC GAGCGCGGCG CGCCTGCGTG TGCGCATCGC CGGCGTGGGC
GAGCGTGACA TGCCCGCGGG GCAAGCGCTG GCCATCGGCA GCCGCGGCAC CGTCGCCATC
CGGCCCGAGG AAATCCAGCT GCGGCCACGT GGCGCATCGC CCGGCGGCAA CGCCAGCGCG
CCGATGCTCG AAGGCGCCGT CGTCGACCGG CTGTACCAGG GCGATGTCAC GCTGTACACG
GTCGAGCTTG CCAGCGGACA CCGGCTGCAA ACGATGGTCG CCAACGCGGG GCCGGTGACC
GACGGGCAGT TTACGCGGGG CGATCGCGTC GAGCTCGACT GGCCCGGCAA CGCCGGCGTG
TTTCTAAGCC GGTGA
 
Protein sequence
MDLLQVHHLS KSFGGRPVLD DIGFNVGSGQ FFTLVGPSGC GKTTLLRLLG GFSEPDSGEV 
LFDGKSLQGV PPEHRPMHTV FQSYALFPHM TVAANIAFPL RMQKLPRHEI DGRLGSLIEN
VRLQGFERYY PHELSGGQRQ RVAIARALAA RPRLLLLDEP LSALDAALQT QMLHELIALQ
QQLGVAFIYV THDQTHALAL SQRIAVMHEG HIVQLDTPEA IYRAPATTFV AGFIGSCNLL
DATVAESSAA RLRVRIAGVG ERDMPAGQAL AIGSRGTVAI RPEEIQLRPR GASPGGNASA
PMLEGAVVDR LYQGDVTLYT VELASGHRLQ TMVANAGPVT DGQFTRGDRV ELDWPGNAGV
FLSR