Gene Rmet_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4393 
SymbolacpT 
ID4041251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand+ 
Start bp990489 
End bp991115 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID637979814 
Productholo-(acyl carrier protein) synthase 2 
Protein accessionYP_586527 
Protein GI94313318 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00555037 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.259291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGG AAGAACTGGG GCGGCTGGCG ACGATGCGGG CCGAGGCGCG GGCGGAGCAG 
TTCGCCGCCG GCCGGTGGCT GGCGCGCCGG CTACTGGCGG TGACATTCGG CGGCGATGCG 
TCCGAGTGGG CGCTGTCGGC CGCGGAGGAT TCGCCGCCAC TGGCGATACA TACGAGCGGA 
GCGGTGGGCG TGCCGGTATT CGTGTCGATT GCCCATTCCG GCGATCACCT GGCCTGCGCG 
GTGGCCGATG TGCCGGTTGG CATCGACATC GAGCACCTGC AGCCGCGCAA GCATCTGGAC 
ACGCTGATCG AAGCCACCAC GACGGAGGCC GAGCGTGCCG CGCTACCCGA ACTGTTGCGC 
GAGAGCGATG CCGATGCGCG TCTCGTGGCG TTTTTTCAAC TCTGGACCCT GAAGGAAGCG 
TGGATCAAGT GCCACGGTGG CAACCTGTTC CAGACCATGA TGGGACATGT GGTGGAGGCG 
CTGCCGGCGC CGATATCCCA GGCCAATGCG GTGACCTGGC GGCGCGATGA CGCCGTGCTG 
GCGTTGGCGG CTTCCGCGCC CGTGGACGGA TTGGGCTTGC CGGATGCCAC CGGTTGGCGG 
CTGCGCGAGC GCGACGCCGC CGACTGA
 
Protein sequence
MSQEELGRLA TMRAEARAEQ FAAGRWLARR LLAVTFGGDA SEWALSAAED SPPLAIHTSG 
AVGVPVFVSI AHSGDHLACA VADVPVGIDI EHLQPRKHLD TLIEATTTEA ERAALPELLR 
ESDADARLVA FFQLWTLKEA WIKCHGGNLF QTMMGHVVEA LPAPISQANA VTWRRDDAVL 
ALAASAPVDG LGLPDATGWR LRERDAAD