Gene Rmet_4382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4382 
Symbol 
ID4041240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp979754 
End bp980506 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID637979803 
Productfamily 2 glycosyl transferase 
Protein accessionYP_586516 
Protein GI94313307 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.267496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.107729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TTTTTCGTCC CATCGTGCTG GTTCCGGTCT TTGACCACGA ACATGCCATC 
GGAGCCATGG TCGAGGCCAT CCTGAGGCAT CCGTGGCCTT GCCTGCTGGT CGATGACGGC
AGCGGCCCGG CGTGCAGCCA GGTGCTGCGC GACCTTGCCG ATGCCCATGG GGAGCGCGTG
ATCCTGATCC GCCTGCCGCA AAACCGGGGC AAGGGCGCGG CGATGATGGC CGGGTTCCAG
GAGGCCGCGA AGCTCGGCTA TACGCACGCG CTGCAGATCG ATGCCGACGG GCAGCACAAT
GCCGACGACA TCGCGCGTTT CTTCACGCTG GCACGCGAGA ACCCGACGGC GGTCATCGCG
GGCTGCCCGG TGTATGACCA GACGGTGCCG CGCCACCGCT TCTATTTCCG GTATCTCACG
CACATCCTGG TGTGGATCAA CACGCTCTCG TTCGAGATCC GCGACTCGAT GTGCGGCTTG
CGCGTCTATC CGCTCGACGC GGTGACAGCG CTGATGCAGG ACGTGCGGCT CGGCCACCAC
ATGGAGTTCG ACACCGAGGT GATCGTGCGC CTGTACTGGC GCGGCGTGCC GGTCGTCAAC
GTTCCGACGC GGGTCACGTA TCCCAGCGAT GGCGTCTCGC ATTTCCGTCT TATCCAGGAC
AACCTGCTGA TGACGGGGAT GCTGACCCGC CTGTTCTTCG GCATGTTGTG GCGAATGCCG
CGTCTGTTGT GGCGCAAGGT GCGCCCCGCA TGA
 
Protein sequence
MTAVFRPIVL VPVFDHEHAI GAMVEAILRH PWPCLLVDDG SGPACSQVLR DLADAHGERV 
ILIRLPQNRG KGAAMMAGFQ EAAKLGYTHA LQIDADGQHN ADDIARFFTL ARENPTAVIA
GCPVYDQTVP RHRFYFRYLT HILVWINTLS FEIRDSMCGL RVYPLDAVTA LMQDVRLGHH
MEFDTEVIVR LYWRGVPVVN VPTRVTYPSD GVSHFRLIQD NLLMTGMLTR LFFGMLWRMP
RLLWRKVRPA