| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4376 |
|---|
| Symbol | |
|---|
| ID | 4041234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 975328 |
|---|
| End bp | 976188 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979797 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586510 |
|---|
| Protein GI | 94313301 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00385754 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.464948 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCC GACCAGATAT CCAACCTATC AGAATCTGGC GGCGGACCGG GTCACAATCC
TCCCACGCGC AAGGCATGAC ACTTGAATTC GAGATCCGCG CATGGGCGGC ATGTGCGCCG
GCGTTGCAGA CACACGCCGA CTGGCTGGCA TGGAGCCGAG CCCCATGGCT GCCGGAAGGT
GCTGATCTGC CCGCGCTTGC CGCGATGGCG CCGATGTTGC GTCGCCGTGT CAATGCCACA
GGACGTGCCG CGCTACATCC CGCCTACGAG ATCGCCGCCA ATGACGCAGG CGTAATGCCG
GCCGTCTTCG CGTCGCGTCA CGGGGATTCG CGCCGCGCTT TTTCGATGCT GAGCGAGCTT
GCCGCCGGCG AACCGCTGTC GCCCACGGCG TTCGGTCTGT CCGTGCACAA CGCGATCGGG
GCGATGTTTT CCATCGACCG GAGCGCGGCA TCCAATATCC AGGCGTTGTC CGGTGGGAAG
GACACCGTCG AGGCCGCCAT CGTCGAGGCC TGCAGCTTGC TGGCCGATGG TGCCGACGAG
GTTCTGCTGG TCTGCTATGA CACGCCGCTT CCCGAGCCGT ACCTGACGTA TGCCGACGAA
CCGCAGTGCC TGTATGGGTG GGCGTGGCGC GTGGGCTTGC CGCGTGCAGG CGCGCCAGTG
TGGACGCTCG AGTTGGCCGA TCCCGCGATC GAGGTGACCG ACAAGTCGGG GGACGGCCCC
GTGGACGGTC AGGGCAAGCC GCTGCTGCCA CACGGCCTGG AGGTATTGCA TTTCGTCCTG
TCCAATGACG CAGGGGCCGG CAAGTCGCAA CTGTTGCATC GCACGGATCA TGCGATCTGG
AAGTGGGGGC GCCATGTTTG A
|
|---|
| Protein sequence | MRRRPDIQPI RIWRRTGSQS SHAQGMTLEF EIRAWAACAP ALQTHADWLA WSRAPWLPEG
ADLPALAAMA PMLRRRVNAT GRAALHPAYE IAANDAGVMP AVFASRHGDS RRAFSMLSEL
AAGEPLSPTA FGLSVHNAIG AMFSIDRSAA SNIQALSGGK DTVEAAIVEA CSLLADGADE
VLLVCYDTPL PEPYLTYADE PQCLYGWAWR VGLPRAGAPV WTLELADPAI EVTDKSGDGP
VDGQGKPLLP HGLEVLHFVL SNDAGAGKSQ LLHRTDHAIW KWGRHV
|
|---|
| |