| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4361 |
|---|
| Symbol | frc |
|---|
| ID | 4041219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 957538 |
|---|
| End bp | 958770 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979782 |
|---|
| Product | formyl-coenzyme A transferase |
|---|
| Protein accession | YP_586495 |
|---|
| Protein GI | 94313286 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | [TIGR03253] formyl-CoA transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0378127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA AGGCACTGGA AGGGGTCCGC ATTCTGGACA TGACGCATGT GCAGGCCGGC
CCGTCGGCCA CCCAGCTGAT GGCCTGGCTG GGTGCCGATG TCATCAAGGT GGAACTGCCC
GGTCGCGGCG ACATCACGCG TAGCCAGCTG CGCGATGTTC CGAACGCGGA CAGCCTCTAC
TTTACGATGC TGAACTCGAA CAAGCGCAGT CTGACGTTGA ACATGAAGAC GCCGGAAGGC
AAGGCGCTGC TTGAAGACCT GGTGCAGCGC TGCGACGTGC TGGTGGAGAA CTTCGGGCCG
GGCGTGCTGG ATCGCGCCGG GTTCGACTGG GACCGCCTGC AGTCGCTGAA TCCGCGCCTG
ATCTACGCAT CGATCAAAGG CTTCGGCCCC GGCCCGTACG CCGATTGCAA GGCGTACGAG
AACGTGGCGC AGTGCATGGG CGGCTCGGCC AGCACCACTG GCAACGAAGA CGGCGTGCCG
ACGGTGACCG GCGCGCAGAT CGGCGATTCG GGCACGGGCG TGCATTGCGT GGTCGGCATC
CTGGCCGCGC TGCTGCACCG CGAGCAGAGC GGGCGTGGGC AGCGGGTGGA AGTCGCCATG
CAGGACTCGG TGCTGAACCT GTGCCGCGTG AAGCTGCGCG ATCAGCAACG GTTGTCGGCC
GGGCCGCTCA AGGAGTATCC GAACGACGAT TTCCAGGACT ACGTGCCGCG CGCTGGCAAT
GCGTCCGGTG GCGGACAACC GGGTGCGGCG CTGCGCTGCT CGCCCGGTGG CGCCAACGAC
TTCGTCTACG TCATCATCCA GCCGCAGGGC TGGGAGCCGC TGATGCGCCT GTGCGGCCGC
GAGGATCTGA TCACGCATCC GCAGTTCGCC ACGCCGGAGG CTCGCCTCAA GTGCCTGGCC
GAGTGCTTCT CGATCGTCGA GAAATGGACG CGGACCAAGA GCAAGTTCGA GGTGATGGCG
GCGCTTAATG ACGTTGACGT GCCGTGTGGC CCGATCCTGT CGATGAAGGA CCTGATCGAG
GATCGCTCGC TCTACGAACG TGGCTATATG GTCGAACTCG ACCATCCGGA GCGCGGCAGG
TACGTGCAGC TCGGCTGCCC GATCTCGCTG TCGGCATCGC CGGTGGAAGT CGAGCGCTCG
CCGCTGCTTG GCGAGCATAC CGAAGAGATC CTCGAGTGGC TCGGCCGCAC GCCGTCGCAA
ATCGTCGCGC TCAAGGCCGC CGGCGCGGTG TAG
|
|---|
| Protein sequence | MNNKALEGVR ILDMTHVQAG PSATQLMAWL GADVIKVELP GRGDITRSQL RDVPNADSLY
FTMLNSNKRS LTLNMKTPEG KALLEDLVQR CDVLVENFGP GVLDRAGFDW DRLQSLNPRL
IYASIKGFGP GPYADCKAYE NVAQCMGGSA STTGNEDGVP TVTGAQIGDS GTGVHCVVGI
LAALLHREQS GRGQRVEVAM QDSVLNLCRV KLRDQQRLSA GPLKEYPNDD FQDYVPRAGN
ASGGGQPGAA LRCSPGGAND FVYVIIQPQG WEPLMRLCGR EDLITHPQFA TPEARLKCLA
ECFSIVEKWT RTKSKFEVMA ALNDVDVPCG PILSMKDLIE DRSLYERGYM VELDHPERGR
YVQLGCPISL SASPVEVERS PLLGEHTEEI LEWLGRTPSQ IVALKAAGAV
|
|---|
| |