Gene Rmet_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4357 
Symbol 
ID4041215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp952413 
End bp953135 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID637979778 
ProductGntR family transcriptional regulator 
Protein accessionYP_586491 
Protein GI94313282 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.899298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.198787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCC AAAGCCAAAC CGACGTCCAG CCGACTTCCG GCCTGACCCT TTCACTGCAG 
CCGATCAATG CGGGTGCCAG CCTGCGTGAC CAGGCCTACG CGATGCTGCG CCAGGCGATT
GCCGATGCCG ACATCTACCA GTCGCGTGAC GAAGTCCGTC TGGACGAGCG CGTGCTGTCC
GAAGCGCTCG GCGTCAGTCG CACGCCGATT CGCGAAGCCA TGACCCTTCT GGAGCAGGAA
GGCTTCCTGC GCACGGTGCC GCGCCGCGGC ATCTACATCA CGCGCAAGAC CAAACGCGAG
ATCGTCGAGA TGATCCAGGT CTGGGGCGCG CTGGAAAGCA TGGCCGCGCG GCTGGCCACG
CTGCACGCCA GCGACGAGGA AATCGGCAAG CTGCGGCATA TGTTCGACAG CTTCCGCGAT
GCCACGCCGG CCGAGCATAT CGAGGAATAC TCCGACGCCA ACATCGCCTT CCATCAGGCG
ATCGTGCAGT TGTCGAAGTC GCAGATCATC ATGGACTCGA TCAAGAACAT CTTTGTCCAT
GTGCGTGCGA TCCGGAAGAT GACGATCTCG CAGAGCGACC GCGCCGCGCG CTCGATCGTC
GATCACCTGC GCATCATCGA GGCGCTGGAG AAGCGCGATA CGGAGCTGGC CGAGCGGCTG
GTGCGCCAGC ACTCGCTGGA TCTGGCGGAC TACGTCGAGA AGCACTGCGA TTTTCTGGAT
TGA
 
Protein sequence
MSAQSQTDVQ PTSGLTLSLQ PINAGASLRD QAYAMLRQAI ADADIYQSRD EVRLDERVLS 
EALGVSRTPI REAMTLLEQE GFLRTVPRRG IYITRKTKRE IVEMIQVWGA LESMAARLAT
LHASDEEIGK LRHMFDSFRD ATPAEHIEEY SDANIAFHQA IVQLSKSQII MDSIKNIFVH
VRAIRKMTIS QSDRAARSIV DHLRIIEALE KRDTELAERL VRQHSLDLAD YVEKHCDFLD