| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4322 |
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| Symbol | ccoN |
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| ID | 4041180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 917180 |
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| End bp | 918769 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637979743 |
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| Product | cytochrome c oxidase subunit I |
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| Protein accession | YP_586456 |
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| Protein GI | 94313247 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I
[TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.779311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAG TCGCCATCCT GATGTCGGCG TTTCTGCTTT CAGTGTTTGC CCTCGGGGCA
TTCATCTGGA GTATGCGGAA GGGCCTGTTC GATACCTCGC CGGCCGCGGC ACGCGTGATC
TTCGCCGATG AGGAGGCTGG GCACTCGGAA GACCCAGCTT CGGCGCGCCA TGGAATTGTC
GACCGGTCGC GCGAAGAAGC CGACCGGTCA TCCGCGCCAG TCGTGTTCCT GTTCATCTGT
TGCGCGATGG TATGGCTTCT GGTTGCTTCG GTCGCCGGCC TGACCGCGTC GATCAAGCTG
CACGAGCCCG ATCTGCTGGC TTCGGTGCCA TGGCTGTCTT TTGGTCGGAT ACGCACGATT
CATTTGAACG CGGTGGCCTA TGGCTGGGCG CCGATGGCGG GGCTTGGCAT CGCGATGTTT
CTGCTGCCGC GCCTACTGAA GACCGAGCTG ATGGGCGGGC GCTGGGCCGT GCTGGGGGCC
GCGCTCTGGA ATGCCGGGTT GATCGCGGGT ATCGGCAGTA TCGCGGCGGG CATTTCCGAT
GGACTCGAAT GGCTGGAGAT TCCCTGGCAG GTTGACATCC TGTTCGTGAT CGGCGGAGCT
TTCGTCGGCT TTCCCCTTGT GTTGACGCTG GTGAATCGCA AGGTCGACCA CCTCTATGTT
TCCGTCTGGT ACATGGGATG CGCGTTGTTC TGGTTCCCCG TGCTCTTTCT CGTTGCCAAC
ATTCCGGGTC TCCATTTCGG CGTGGAGCAG GCCACTATGA ACTGGTGGTT CGGGCATAAC
GTGCTGGGTC TGTTCTACAC GCCGCTTGCG CTTGCCTCGA TCTACTACTT CCTGCCGAAG
ATCATTGGGC AGCCTGTCAG GTCTTATGGC TTGTCATTGC TTGGGTTCTG GGCGCTGGCT
TTCTTCTACG GACAAGTGGG CGGGCACCAC CTGGTGGGCG GACCGGTACC GGGGTGGCTG
ATCACACTGT CAATCGTGCA GAGCATGATG ATGTTGATTC CAGTCATCGC GTTCTCAATC
AACCAGCACC AGACGCTACG AGGCCATTTT CGCCAGCTGA TCGAATCCCC GACGCTTCGG
TTCGTGACTT TCGGCGGCAT GATGTACACG CTGAGCTCGA TTCAGGGTTC CTTCGAGGCG
TTGCGAGCCG TCAATCGCGT CACCCACTTC ACGCACTACA CGGTCGCACA CGCGCATCTT
GGCCTCTATG CCTTCGTGAG CTTCGCGTTC TTTGGCGCGA TCTACTTCAT CGTGCCGCGT
ATCACCGGTC GCGAGTGGCC GTACCGTTGG ATGATCTATT GCCACTTCTG GCTGGCTGCC
GGCGGGATCT GCGTCTACTT CGTCAGTCTG ACCATTGGCG GTTGGCTGCA GGGCATGGCC
ATGCTTGATG CCGCTCGTCC GTTCATGGAT TCGGTGCAGG TGACCATTCC TTATCTGAAG
GCGCGGTCGG TGGGCGGCAC GATGATGCTG GCCGGCCACC TTTGTCTTGT TGCGAACTTC
GTATGCGCGA TCTTCGGGTT TGGTCCCAAG CGCGATCGTC CTGCGCTGTT TCACCAGGGC
GGCAAGCCGG AGCAGGGAGT GGAAACATGA
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| Protein sequence | MNTVAILMSA FLLSVFALGA FIWSMRKGLF DTSPAAARVI FADEEAGHSE DPASARHGIV
DRSREEADRS SAPVVFLFIC CAMVWLLVAS VAGLTASIKL HEPDLLASVP WLSFGRIRTI
HLNAVAYGWA PMAGLGIAMF LLPRLLKTEL MGGRWAVLGA ALWNAGLIAG IGSIAAGISD
GLEWLEIPWQ VDILFVIGGA FVGFPLVLTL VNRKVDHLYV SVWYMGCALF WFPVLFLVAN
IPGLHFGVEQ ATMNWWFGHN VLGLFYTPLA LASIYYFLPK IIGQPVRSYG LSLLGFWALA
FFYGQVGGHH LVGGPVPGWL ITLSIVQSMM MLIPVIAFSI NQHQTLRGHF RQLIESPTLR
FVTFGGMMYT LSSIQGSFEA LRAVNRVTHF THYTVAHAHL GLYAFVSFAF FGAIYFIVPR
ITGREWPYRW MIYCHFWLAA GGICVYFVSL TIGGWLQGMA MLDAARPFMD SVQVTIPYLK
ARSVGGTMML AGHLCLVANF VCAIFGFGPK RDRPALFHQG GKPEQGVET
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