| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4319 |
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| Symbol | |
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| ID | 4041177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 914046 |
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| End bp | 914765 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979740 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_586453 |
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| Protein GI | 94313244 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACA AGACTTTCCT GATCACCGGT GCGAGCAAGG GAATCGGCCG GGCGTTGTCC
CATCGCCTGG CGGCTGCCGG GCACAAAGTG ATCGGCGTCG CGCGTAACGC CGACCCCGGT
TTCCCCGGCA TTCTGGTGCC CATCGATCTC ACGGACCCGG TTGCCACTGA ACATGCGCTG
ACGACACTGA GGTCCGAGCA CGTGATCGAC GGTGTCGTGA ACAACGTGGG GTTCATCGAG
CTTGCGCCAC TTGGCAATAT CGACCTGGAT GCCATGGACG ACATGTTTCG GTCGAACCTG
CGGCCAGCCG TTCAGCTTGT CCAGGCGCTG TTGCCGGACA TGCGGGAGCG GGGTTGGGGC
CGTATCGTGA ACCTGTCGAG CCTTGTCGTG CTGGGCGTTG CGAACCGCTC CGTCTATGCC
GCGGCCAAAA GCGCCATGAT CAGCTTCACA CGAACGTGGG CACTCGAACT CGCACCCACC
GGGATCACGG TGAATGCGGT CGCGCCGGGG CCTGTTGAAA CCGAAATGTT CCGTGCCAAT
ACGCCACAGG GCAGCGATGC GGAGAAGCGA TTTCTGTCCA TGGTGCCGAT GGGGCGTCTG
GGCAAGCCGG ATGAACTGGC CGCCGCGATC GAATTCCTGC TTTCCGAGCC TGCCGGCTTT
ATTACGGGGC AGACGCTGTT CGTGGATGGC GGCGCGTCGA TTGGCAAGGC AGCGCTCTAG
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| Protein sequence | MSHKTFLITG ASKGIGRALS HRLAAAGHKV IGVARNADPG FPGILVPIDL TDPVATEHAL
TTLRSEHVID GVVNNVGFIE LAPLGNIDLD AMDDMFRSNL RPAVQLVQAL LPDMRERGWG
RIVNLSSLVV LGVANRSVYA AAKSAMISFT RTWALELAPT GITVNAVAPG PVETEMFRAN
TPQGSDAEKR FLSMVPMGRL GKPDELAAAI EFLLSEPAGF ITGQTLFVDG GASIGKAAL
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