| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4315 |
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| Symbol | |
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| ID | 4041173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 909607 |
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| End bp | 911121 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979736 |
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| Product | NodT family outer membrane lipoprotein |
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| Protein accession | YP_586449 |
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| Protein GI | 94313240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTCC AGTCACTTTA TCCACCACAC CAATTGATGA GTCGGAAAAT GGTTTGGCAA
TCACCCCAGG CGAAGCAGCG CGCCACACTG CTCGCGCTCT CAACGATAGT GGCCGCAGTA
CTTGCCGGAT GCGCGAACTA TGCGGGCATT CATAGCGACA AGGAGATGGC ACTGCCGACG
CAGATTGCCA CTGCGCAAAG CCTGCCGTCC GAGGGAGGGC ATTGGCCCGC CACGGACTGG
GCATCACAGT TTGGCGATGC GCAACTCAAG GCCCTGATCG ACGAAGCCTT GGCGGGTAGC
CCATCCATCG ACAAGGCACG TGCCCGTATT GCGGCGGCCG TGGCATTCAG CGAAAGCGCC
AATGCGAACA CCCTCCCTCA GGTAGGCGCG GGGTATTCCT GGACTCGCCA GCGACTGACT
GAAAGCACCT TTATACCGCC AGCCTTTGCC GGCACGTGGC AATCGGAAAA CAAGGCGATC
ATCAGTGCGT CCTACGAGCT CGATCTTTGG GGCAAGAATC GCGAAGCCCT CCGTTCCGCG
GTCTCGATGG TCCACATGAC GGAGGCCGAA GCGGAGCAGG TAAGACTGAG CCTGAGTCAG
GCCATCGCCC GCAGTTACAA CGAGCTCGCC CGCTTGTACG CGCTTCTGGA TATTGCGCGC
GATGAAGTCA CGCAACGCGA AGAAGTCCTG CGGGTCACAC GCGGTCGGGT CCGGATGGGA
CTGGATACCG CCGTGGAGCA ACAGACTGCC GAAGCGAACC TCGCGGCGGC GCAGGTTTCC
GTTTCGGCCC TTGAGGGAAG TATCCAGCGT ACCCGCTACC AACTTGGCGC GCTGCTCGGC
AAAGGCCCGG ACCGCGGGCT CGCCATCGCC AAGCCGGCAC TCGGTGGCTC CGAAGAAATT
CATCTGCCTG ACAACCTTCC GGCAGACCTC CTGGCACGCC GCCCCGACAT CGTCGCCGCG
CGCTGGAGAG TGGAGGCCAC CACTCACGAC ATCAAGGTGG CGAAAGCCGA GTTCTACCCA
GACATCAATC TGAGCGCTGC CATCGGCCTC GATGCTTTCG GGTGGGGACG CTTTCTGCAT
GCGGCGAGCC GCACGGTCTC CGCCGGCCCT GCCATCCACC TGCCGATCTT CGACGGTGGC
GCACTGCGGG CGCAACTAAA AGGACGCTAC GCCGACTTCG ACTTTGCCGT GGCGAATTAC
AACGACACCC TGATCCAGGC ATTGACCGAT GTGGCCACGC AACTGTCGGA CATTCGCTCC
GTCGACGCCC AGATCATCAA CGCGGTCCGA ACCGACGAGG CCGCGCAACG CGCCTTGAAC
CTGGCGATGG CGCAGTACCG CGCCGGCCTG ACCACGCAAT TGACGGTGCT GAATGCGCAG
ACCACGGCAT TGGCCAGTAG CCAGACCGTG ACAACGCTCC GAATGCAACG ACGCGACCGC
CAGATTGCGC TGGCAGCGGC CCTCGGCGGC GGGTACACGG CCGACGACAC ACAAAGCGCG
GACACAACCC GGTGA
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| Protein sequence | MHVQSLYPPH QLMSRKMVWQ SPQAKQRATL LALSTIVAAV LAGCANYAGI HSDKEMALPT
QIATAQSLPS EGGHWPATDW ASQFGDAQLK ALIDEALAGS PSIDKARARI AAAVAFSESA
NANTLPQVGA GYSWTRQRLT ESTFIPPAFA GTWQSENKAI ISASYELDLW GKNREALRSA
VSMVHMTEAE AEQVRLSLSQ AIARSYNELA RLYALLDIAR DEVTQREEVL RVTRGRVRMG
LDTAVEQQTA EANLAAAQVS VSALEGSIQR TRYQLGALLG KGPDRGLAIA KPALGGSEEI
HLPDNLPADL LARRPDIVAA RWRVEATTHD IKVAKAEFYP DINLSAAIGL DAFGWGRFLH
AASRTVSAGP AIHLPIFDGG ALRAQLKGRY ADFDFAVANY NDTLIQALTD VATQLSDIRS
VDAQIINAVR TDEAAQRALN LAMAQYRAGL TTQLTVLNAQ TTALASSQTV TTLRMQRRDR
QIALAAALGG GYTADDTQSA DTTR
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