| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4301 |
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| Symbol | |
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| ID | 4041159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 895097 |
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| End bp | 896746 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979723 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein-like protein |
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| Protein accession | YP_586436 |
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| Protein GI | 94313227 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0346412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00817014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTGCCG GCATCCCTTA CGACGAGGCG CGCAAGCGCT ACCGGCCCGG CACGGCGCCG
GCGGTGCGCA GTGACAACAC CTCGGCCGAA GCGCTCCTCA AGGGCTACCA CCCCGACCAC
GGGCCGGACG CCCGCGTTGC CCTCGCCGTC GGCGTGAACC GCGGCGATTC CTGCCAGCCG
GATCTCGCGC GGCATCTGCA AGCCAATGCG CTGATCGACG ACGTCGACAT TGCCGGTGCC
CAACTCATGG CCACCGATGT GTTGGTCATT GGTGGTGGAG GTGGCGGGTG CGCCGCGGCA
CTCACCGCGG CAAAGCATGG GGCGCGGGTC ATCCTCGCCA CCAAGCTTCG CCTCGGCGAC
AGCAACACTG TGATGGCCGA AGGCGGGATA CAGGCCGCCA TCGGAGAGGA CGACAGCCCT
CAATTGCACT TCGAGGACAC GCTGCGTGCC GGACACTTCT GCGGCGATCC CGCACTCGTA
GCGCAAATGG TGATGGATGG TCCGGATGTC ATTCGCTGGC TGATCCAGCT CGGCATGATG
TTTGACCAGG AAGAGGATCG GCCAATCGGC GGCAACCTTC TGCGCAAAAA GCCCGGCGGC
GCCTCGGCCG CGCGCATTCT TTCCTACCGG GACTACACCG GGCTGGAGAT GATGCGGGTG
CTGCGGGAAG CGGTGGACCT GGATCCCGGC ATCGAGGTAT GGAACCGCTG CCCGGCGGTC
GAGCTGCTGT CCGACGAGCG GGGAAACTGC GCAGGGGCCG TGATCTACAA CCTCGAATCA
CGCACCTTTG TGCTAGTGCG CGCTGCTGCC GTGATCATTG CTACCGGCGG AGCCGGGCGC
CTGCACCTGA ATTCGTTTCC AACATCCAAT CATTTCGGTG CCACCGCCGA CGGCCTCGTG
CTCGCCTACC GGATCGGAGC GCGCCTGCGC GAGCTCGACT CGTTCCAGTA CCACCCCACC
GGCATTGCGT ACCCTCCCCA CCTTGCAGGC GGACTCATCT CCGAGGCCGC GCGCTCCGCG
GGCGCCAAGC TGATCAACGG CGAGGGTGAG CGCTTTGTGG ACGAACTCAA GGCACGGGAC
ATCGTGGCCT CGGCGATATT GCGCGAATGT GCGCAGGGGC GCGGCATCAT CCGTGAGGGG
CAGGTGGGCG TGCTGCTCGA CACGCCGACG CTCGAAATGG AGCATCCCGG CATCCTGGAC
AAGCGCCTTG TGACGTTGAG CCACCTTGCG CACAAGTGCG GTCACGATGC AGCGAAGGAA
CCCTTCCTTG TCTACCCAAC CCTTCACTAC CAGAACGGCG GCGTTGCGAT CGACGGACAT
GGGACCACCA GCGTATCCGG ACTGTACTGC GTGGGTGAGG TAGCGGGAGG CATCCACGGG
CGCAACCGGC TGATGGGGAA TGCGCTGCTC GACATCCTAA GCATGGGTCG GCGCGCGGGC
GCGTCGGCAG CGGAGGCGAA GCGTTCGGCT GTGGCCAGCC GCGCAGGGAT CGGCCACGTG
CACGCATGGC AGCGGGAACT GACGCTGGCT GGGCTACCTT TGCACGTCAA GGCACCGATT
CTCTTTCCTG GCTACGCGCA TTTCGATCTG CGCGTCAATG CAGGCCTGCG CGCTGGCGTC
CGCGGCCGGG CCGCTGGCGG TGTCCGGTGA
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| Protein sequence | MPAGIPYDEA RKRYRPGTAP AVRSDNTSAE ALLKGYHPDH GPDARVALAV GVNRGDSCQP
DLARHLQANA LIDDVDIAGA QLMATDVLVI GGGGGGCAAA LTAAKHGARV ILATKLRLGD
SNTVMAEGGI QAAIGEDDSP QLHFEDTLRA GHFCGDPALV AQMVMDGPDV IRWLIQLGMM
FDQEEDRPIG GNLLRKKPGG ASAARILSYR DYTGLEMMRV LREAVDLDPG IEVWNRCPAV
ELLSDERGNC AGAVIYNLES RTFVLVRAAA VIIATGGAGR LHLNSFPTSN HFGATADGLV
LAYRIGARLR ELDSFQYHPT GIAYPPHLAG GLISEAARSA GAKLINGEGE RFVDELKARD
IVASAILREC AQGRGIIREG QVGVLLDTPT LEMEHPGILD KRLVTLSHLA HKCGHDAAKE
PFLVYPTLHY QNGGVAIDGH GTTSVSGLYC VGEVAGGIHG RNRLMGNALL DILSMGRRAG
ASAAEAKRSA VASRAGIGHV HAWQRELTLA GLPLHVKAPI LFPGYAHFDL RVNAGLRAGV
RGRAAGGVR
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