Gene Rmet_4286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4286 
Symbol 
ID4041144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp877333 
End bp878394 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content62% 
IMG OID637979708 
Productextra-cytoplasmatic solute receptor 
Protein accessionYP_586421 
Protein GI94313212 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.85012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATA AACGTCACAA TACCGGACCG ATCCACGCCT CGCAGAGCGT GGCCGTATCT 
GGAGAGAGAA AAATGACGAT GCCTGTTGCC CGCCGTGTCC TGCACGCCCT TGCCACTCTG
GCCCTGACCC CACTGGCGTT TGCCGCGGGC GCCGCGCATG GGGCGTGGCC AGAGAAGCCA
ATCCGGATGG TGGTGGGCTT TCCGCCGGGC GGGCCGGTCG ATACGCACGC GCGCATTCTC
GCCGAAAAAT TGCAGCCCAT TCTCGGGCAG TCGGTCGTGC TCGACTACAA GGCCGGCGCC
GCCGGCAATA TCGGATCGGA CAACGTCGCC AAGTCCGCGC CGGATGGCTA CACGTTGCTG
ATTGCCAATA CGGGCCAGAT GACGATCAAT AATGCGATCT ATCCCAAGCT GCCCTACAGC
ATGCCGAAGG ACTTTGCCCC CGTGGCGCGT ACCGCGCTGA TTCCGCTGGT GATGGTCGTC
AACAACAACG TGCCCGCAAA GAATCTGAAG GAATTCATCG CCTATGCGAA GGCGAATCCG
GGCAAGCTGA ATTTTGCATC GGGCGGCAAT GGCGGTATCT CGCATCTGAT GCCGGAGATG
TTCAAGCAGG CATCGGGCAC GTTCATCGTT CATATCCCTT ACAAAGGTAG CGCGCCGGCA
CTGACGGACG TGATGGGTGG CCAGGCGGAG ATGATGGCCG ACTCCATTCC GTTGTTCACC
CAGTACATCA AAGGGGGCAA GGTACGCGCG CTGGCGGTAA CGTCGGGCAA ACGATCGCCG
GCGCTGCCCG ATGTGCCGAC AATGGAAGAA GCCGGCCTGA AGGGATTCGA GGTGGTGGGC
TTCTACGGGG TGCTGGCACC GGCCGGCACC CCGAAGGACA TTGTCGACAA GCTGTCGGCC
GCGCTGCGTA CCGTGCTGGC GGACCCAGAT ACGAAGGCCA AGCTTGAATT CCAGGGGGCC
GAACCAGCGT GGCAGTCGCC GGACGCCTTT GCGGCGACGA TCGCCAGCGA GCAGAAGCGG
TGGGGACAGG CCGTCAAGGC ATCGGGCGCG CGAATCGACT GA
 
Protein sequence
MSYKRHNTGP IHASQSVAVS GERKMTMPVA RRVLHALATL ALTPLAFAAG AAHGAWPEKP 
IRMVVGFPPG GPVDTHARIL AEKLQPILGQ SVVLDYKAGA AGNIGSDNVA KSAPDGYTLL
IANTGQMTIN NAIYPKLPYS MPKDFAPVAR TALIPLVMVV NNNVPAKNLK EFIAYAKANP
GKLNFASGGN GGISHLMPEM FKQASGTFIV HIPYKGSAPA LTDVMGGQAE MMADSIPLFT
QYIKGGKVRA LAVTSGKRSP ALPDVPTMEE AGLKGFEVVG FYGVLAPAGT PKDIVDKLSA
ALRTVLADPD TKAKLEFQGA EPAWQSPDAF AATIASEQKR WGQAVKASGA RID