| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4274 |
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| Symbol | leuD |
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| ID | 4041132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 865204 |
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| End bp | 865842 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637979696 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_586409 |
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| Protein GI | 94313200 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.123411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGGCCT TCACAGTACT CGATGGGCTG GTGGCGCCTA TTGACCGTGC CAATGTGGAT
ACGGACGCCA TCTTGCCGAA GCAATTCTTG AAATCCATCC AGCGCAGCGG ATTCGGTCCG
TATCTGTTCG ACGAGTGGCG CTATCTCGAC CCTGGCGAGC CAGGGCAGGA CTGTTCGCAG
CGGCCGCGCA ATCCTGATTT CGTGCTTAAC CAGCCGCGAT ACCAAGGCGC TTCGGTGCTG
TTGGTGCGCG AAAATTTCGG TTGCGGATCG TCGCGCGAGC ATGCGCCATG GGCCCTTGAA
GACTTCGGGC TACGCGCGCT GATCGCCCCC AGCTTTGCGG ACATCTTCTG CAACAACTGC
ATGAAGAATG GCCTGCTGCC GATCGTGCTG GAGGCTAACG TCGTTGACAG GCTTTTCGCT
GAGGTCGACG CCACGCCGGG ATACCGCCTG CATGTCGATC TGGCAACACA ACTGGTGACG
ACACCCTCGG GCGACGCCAT TTCTTTCTCG ATGGATCCAT TCAAGAAGCA CTGCGTGCTG
AATGGCTTGG ATGACATCGG GCTGGCGCTG CAGCACGAGG AGGCGATCCG TCGCTACGAG
CTGAACAGAA TCAGGCACGA GCCCTGGCTG TTCCTATGA
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| Protein sequence | MKAFTVLDGL VAPIDRANVD TDAILPKQFL KSIQRSGFGP YLFDEWRYLD PGEPGQDCSQ
RPRNPDFVLN QPRYQGASVL LVRENFGCGS SREHAPWALE DFGLRALIAP SFADIFCNNC
MKNGLLPIVL EANVVDRLFA EVDATPGYRL HVDLATQLVT TPSGDAISFS MDPFKKHCVL
NGLDDIGLAL QHEEAIRRYE LNRIRHEPWL FL
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