| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4273 |
|---|
| Symbol | leuC |
|---|
| ID | 4041131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 863774 |
|---|
| End bp | 865207 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637979695 |
|---|
| Product | isopropylmalate isomerase large subunit |
|---|
| Protein accession | YP_586408 |
|---|
| Protein GI | 94313199 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
|---|
| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAAG CCAATCCACC AGCCAGCCTG CTCGACAAGC TGTGGGCCAG CCACGTGATT
CACGAGCAGT CCGACGGACC TTCGCTGATC TATATCGACC GGCACCTGGT CAATGAGGTA
ACCAGCCCAC AGGCCTTCGA GGGGCTGCGC CTGCATGGCC GTGAGGTATG GCGTCCTGCA
TCGGTGCTGG CCACGGCCGA CCACAACGTG CCAACTACCG AACGGGCGGC GGGCATTGCC
GACCCGATCA GCCGCGCGCA GGTCGACGCA CTCGAGCGCA ACTGCGCTGC GACTGGAATC
GTGAACTTCG GCATGAACGA CCCGCGCCAG GGCATTCTGC ACGTGGTGGG TCCCGAGCGT
GGCGCGACGC TGCCCGGTAT GACCATTGTC TGCGGCGACT CACATACATC CACACATGGC
GCCTTCGGAG CCTTCGCTTT CGGTATCGGT ACCTCGGAAG TCGAACAGGT GCTCAGCGCG
CAGTGTCTGT GGATGAAAAA GCCGCGCTCG ATGCTGGTCC GGGTAGAAGG TGAGTTGGCG
GCAGGTGTTT CAGCCAAGGA CATCGCGCTG GCGCTGATCG GACGCATTGG TACGGCGGGA
GCGACCGGGT ACGTGATCGA GTTCGCCGGC AGCACCATCC GTGGCCTCAG TATGGAAGGG
CGCATGACCG TCTGCAACAT GGCGATCGAG GCGGGGGCTC GCGCTGGCAT GGTGGCCGTG
GACGAAACCA CGTTGGCATA CTTGGCCCAT CGCCCGCAGG CGCCGCAAGG TGAAGCATGG
GAAAGTGCCA GCGCCTACTG GCGCACGCTG CGCAGCGATC CGGACGCAGT GTTCGACGCG
GTCGTGGACA TTGGTGTTGC GACGATCCGG CCGCATGTGA CATGGGGCAC GTCCCCGGAA
ATGGTGGTGG CGATCGACGA GCGCATTCCC GATCCGCGAC AGGAAGCCGA TCCGGTCAGG
CGCCGTGGCA TGGAACGGGC ACTAACCTAC ATGGGGCTGG AGCCCGGCAT CAAAGTGGCA
TCTATCGCGC TCGATAAGGT TTTCATCGGG TCGTGCACCA ATGCACGGCT CGAGGACTTG
CGAGCCGCCG CCGACGTGCT GCGCGGCCGC CACGTGGCGT CGAACATTCG TCAGGCGCTA
GTGGTGCCCG GCTCCGGGCT GGTGAAGTCC CAAGCGGAAG CGGAAGGCCT TGACAGGGTT
TTCATCGACG CTGGCTTCGA GTGGCGTGAG CCTGGATGCT CAATGTGCCT GGGCATGAAT
GACGATCGTC TTGCTCCTGG TGAGCGCTGC GCATCCACCT CAAATCGCAA CTTCGAAGGC
AGGCAGGGGC CCGGTGGTCG CACCCACCTG GTCAGCCCGC AAATGGCCGC GGCAGCGGCG
GTTGCCGGGC ACTTTGTCGA CGTAAGCACC GTGCTGCAGG AGAAGTCAGC GTGA
|
|---|
| Protein sequence | MVQANPPASL LDKLWASHVI HEQSDGPSLI YIDRHLVNEV TSPQAFEGLR LHGREVWRPA
SVLATADHNV PTTERAAGIA DPISRAQVDA LERNCAATGI VNFGMNDPRQ GILHVVGPER
GATLPGMTIV CGDSHTSTHG AFGAFAFGIG TSEVEQVLSA QCLWMKKPRS MLVRVEGELA
AGVSAKDIAL ALIGRIGTAG ATGYVIEFAG STIRGLSMEG RMTVCNMAIE AGARAGMVAV
DETTLAYLAH RPQAPQGEAW ESASAYWRTL RSDPDAVFDA VVDIGVATIR PHVTWGTSPE
MVVAIDERIP DPRQEADPVR RRGMERALTY MGLEPGIKVA SIALDKVFIG SCTNARLEDL
RAAADVLRGR HVASNIRQAL VVPGSGLVKS QAEAEGLDRV FIDAGFEWRE PGCSMCLGMN
DDRLAPGERC ASTSNRNFEG RQGPGGRTHL VSPQMAAAAA VAGHFVDVST VLQEKSA
|
|---|
| |