| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4267 |
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| Symbol | ycaC |
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| ID | 4041125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 857870 |
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| End bp | 858511 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637979689 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_586402 |
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| Protein GI | 94313193 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.450558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGCG AACCCATCCG CGATCCACTC AAAGACCATC TGCTTACACC GCAGAACGCA
GCCTTCGTTG TCATTGACTA TCAGCCAGTG CAGGTGAACT CGATTGCCTC GATGGACCGG
CAACTGCTGA TCAACAACAT CGTTGGTTCG GCGAAGGCAG CGATTGCTTA CAAGCTGCCC
ATCATCCATT CGACTGTGAA CGTGAAGACC GGCCTCAACA AGCCGCCCAT TCCACAGCTC
GCAAAAGTGC TGAAGGACTA TCCCACCTAC GATCGCACGA CCATCAATTC CTGGGAGGAT
GTCGAGTTCC GCGCAGCCGT AAAGGCAACC GGCCGCAAGA AGCTCATCAT GACTGCGCTG
TGGACTGAAG CCTGCCTGAC GTTCCCTGCG CTCGACGCGC TGGCCGAAGG CTTCGAAGTC
TATGTGGTGG TTGATGCAGT TGGCGGTACA TCCGGAGCCG CGCATGAGGC AGCGCTGCGC
CGCATCGAGC AGGCCGGCGG AAAAATGATC AGCGTGGCCC AGCTGTTTTG CGAACTGCAG
CGCGACTGGT CGCGCGCGGA GACCGTACCC GCCTTCATCA ACCTGTTTAT CGAGACCGGT
GGCACGGCCG GCATCCAGTT CTCATACGAC CGCACCGAGT AA
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| Protein sequence | MASEPIRDPL KDHLLTPQNA AFVVIDYQPV QVNSIASMDR QLLINNIVGS AKAAIAYKLP
IIHSTVNVKT GLNKPPIPQL AKVLKDYPTY DRTTINSWED VEFRAAVKAT GRKKLIMTAL
WTEACLTFPA LDALAEGFEV YVVVDAVGGT SGAAHEAALR RIEQAGGKMI SVAQLFCELQ
RDWSRAETVP AFINLFIETG GTAGIQFSYD RTE
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