| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4251 |
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| Symbol | ecpD |
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| ID | 4041109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 837241 |
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| End bp | 837993 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979673 |
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| Product | periplasmic pilus chaperone |
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| Protein accession | YP_586386 |
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| Protein GI | 94313177 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATGA CACGCACGCG GATGATTCGA TATGTCTGGA CCACGACTTT GCTGCTGGTA
CTCGGTCTGG CCGTTGTGTT GCAGGCCGAG GCATCGGTGG TCCTTGCCGG CACGCGCGTG
ATTTTTAACG CCAATGAGCG TGAGACGACG GTCAGGCTGA GCAACGAGGG CAAGGTGCCA
GCGCTCACGC AGGTGTGGCT GGACAAGGGC GATCCCAAAG CGGCACCCTC GGAGATCTCC
GTGCCGTTCA CGGTAACACC GCCGGTATCG CGCATCGACC CTGGTAAGGG GCAGACGCTG
CGGATCTTTT ATACCGGTGA GGCGCTGCCG CGGGACAAGG AATCGGTCTT CTGGCTGAAC
GTGCTGGAGA TTCCGCCCGA AGCCAGTGGG GAGGCCAACA AGCTGCAACT GGCCTTCCGC
ACGCGCATCA AGCTCTTCTT CCGGCCGGCC GGGCTGGCCG GCACGGCGCA GGATGCGCCA
GCCAAGACCG AGTGGCGGTT GCTGCCGGGC GGCAAGCAGG TGCAGGTTCG CAATCCAACG
CCGTACTTCA TCTCGTTCTC TGCTTTCGAG ATCGAGGGCA ATGGCAAGTC GGTGAAATTC
GATGATGGCG GCATGGTCGG CCCCGGAGAC ACACAGGTGT TTGCGCTGAA CACCGCTGCG
ACTCCCGCGC CCGGCCTGAA GGTTCACTAC CACGCCATCA GCGACTTTGG TGGCGCCATT
GACGGAGAGG CCGCGCTCGC CGTCACTCCA TGA
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| Protein sequence | MIMTRTRMIR YVWTTTLLLV LGLAVVLQAE ASVVLAGTRV IFNANERETT VRLSNEGKVP
ALTQVWLDKG DPKAAPSEIS VPFTVTPPVS RIDPGKGQTL RIFYTGEALP RDKESVFWLN
VLEIPPEASG EANKLQLAFR TRIKLFFRPA GLAGTAQDAP AKTEWRLLPG GKQVQVRNPT
PYFISFSAFE IEGNGKSVKF DDGGMVGPGD TQVFALNTAA TPAPGLKVHY HAISDFGGAI
DGEAALAVTP
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