Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4244 |
Symbol | |
ID | 4041102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 831685 |
End bp | 832581 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637979667 |
Product | LysR family transcriptional regulator |
Protein accession | YP_586380 |
Protein GI | 94313171 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.291884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAGACA TGCCAATGAC GTCCAGTGTG ACCATCAATC AGTTGCGCCA TTTTCTGCTG GTCGTGGAAC ATGGCGGATT CCGCCCCGCG GCGGGCGAAG CGTTCCGGTC GCAGCCGGCA CTGTCGCGGT CCATCAAGGA GCTTGAACAA CGCCTGGGCG GCGCGCTGTT CGAGCCGGGC CGCGCGGATG TCACACAGCT TGGCGCAGCC TGTCTGCCGT ACGCGCGAGA CCTGATCGAT CACTTCGATC GCGCGGTTGG CGCGATGCAG CGACTAGCGG ACAGGGAGGA GGGGACGCTA GCCATTGCCT CGGTGCCTAC CATTGCTACC CAGTGGCTTC CGGAGCTTAT CCGCCGCTAT ATCGAGCGCT ACCCGAAGAT CGAGATTCGG GTGCTCGATG ATCATTCTCG TAATATCCAG GCGATGGTTC TGGCTGGCGA GGTGGACTTT GGCCTCTGCA GCCGTGTCGG CAACGACACG CGGCTGCGGT TCCAGTCATT GATCAAGGAC AGCTTCGGAC TGGTTTGCCG TGTTGATCAC CCACTTGCGA ACCGACGCAC GGTGCGATGG AGTGAGATCG CCAGCCTGCC GATGATCGGG ACTGTGGCGC ACAAGCAGAT CGAGGGCGTA CCGGAAATGG AGCTGTTGGC AGGCAGCCAT CTGTTCGTCT CGAACATGCT GTCGCTGATT GCGATGCTTG AAGAAGGGCT TGGCGTGACC ATACTGCCTT CGCTCGGCGT GCCATCCAAT GCCCGGGATC TCGTCTTCGT GCCGCTGACA GGGCCCAAGG TTCACCGTGA ACTTGGCATT CTTTCCCTGC GCAGCAGATC CCTGAGTCCC GCAGCGGCGC CGATGGCGGA TATGTTGCTC GAACACGCGC TGGTTGCGAA TCGCTGA
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Protein sequence | MRDMPMTSSV TINQLRHFLL VVEHGGFRPA AGEAFRSQPA LSRSIKELEQ RLGGALFEPG RADVTQLGAA CLPYARDLID HFDRAVGAMQ RLADREEGTL AIASVPTIAT QWLPELIRRY IERYPKIEIR VLDDHSRNIQ AMVLAGEVDF GLCSRVGNDT RLRFQSLIKD SFGLVCRVDH PLANRRTVRW SEIASLPMIG TVAHKQIEGV PEMELLAGSH LFVSNMLSLI AMLEEGLGVT ILPSLGVPSN ARDLVFVPLT GPKVHRELGI LSLRSRSLSP AAAPMADMLL EHALVANR
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