Gene Rmet_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4228 
SymboltnpA 
ID4041086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp813319 
End bp814419 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID637979651 
Producttransposase ISRme1 
Protein accessionYP_586364 
Protein GI94313155 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00917968 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCG CTGACACCTT CACCGAAAGT TTGTTCACCA TGCGGCGGCT GGAAGATTTC 
GTGCCGAAGT CCCACCCCCT GCGCGCGATC CGCACCATGG CGAACCAGGC GCTGGCGAAG
ATGGATCGGC TGTTCGCGCA AATGTACGAG GCCGATATCA AGGGTGGCCG GCCCAGCATC
GCGCCGGAGA AGTTGCTGCG GGCCATGCTG CTGCAGGTGC TCTACAGCGT CCGGTCGGAG
CGCCAGCTCA TGGAACAGAC GCACTACAAC TTGCTGTTTC GCTGGTTCAT TGGCCTGGCG
ATGGATGATG TGGTCTGGGT GCCCAGCGTC TTCAGCAAGA ACCGGGAACG GCTGATCAAG
CACGATGCTG TGATCGACTT CTTCAACGAA GTGCTGGCCA TCGCGCAGAA GAAGGACTGG
CTGTCGGGCG AGCACTTCAG CGTCGACGGC ACGTTGATTA AGGCGTGGGC TGGCCACAAG
AGCTTTGTAC GCAAGGATGG CGACGACCAA GACGATAACG ACGGTGCTGA CTTCAAGGGT
GAAAAGCGCA GCAACGAGAC GCACGAGTCC AAAACCGATC CCGATGCCAA GCTGTACCGC
AAGGGCAAAA CCGCCAGTGA ACTGCGTTAC ATGGGTCATA CCCTGAGCGA CAACCGCCAC
GGCCTGGTGG TGAGCGCCAT GGTGACCAAT GCGGACGGAC ACGCCGAGCG CGAGGCCGCG
AAGGTCATGC TCAACGATGC CAGGCAGGTG ATTGAGGACC TGAATGTGGA AGTCACCGTG
GGTGCGGACA AGGGCTACGA CGCGCACGAG TTCATTCAAG CCTGCCTGGA GTTGAAGGTG
ACGCCGCACG TCGCACAAAA CACCTCTGGC CGCCGCTCGG CCGTTCCCGA CGCCATTGCA
GGCACCAAGG GTTATGCCAT CTCACAGCAG AAGCGCAAGC TGATTGAACA AGGCTTTGGA
TGGGCCAAGA CCGTTGGGCG CATGCGCCAG GTGATGGTGC GCGGACTAAA GAAGGTCGAT
CAAATGTTTG TGCTGAGCAT GGCCGCCTAC AACCTCGTGC GCATGCGTTC GCTGGGACAA
ATCCGTCCGC AGTTGCAGTA A
 
Protein sequence
MRGADTFTES LFTMRRLEDF VPKSHPLRAI RTMANQALAK MDRLFAQMYE ADIKGGRPSI 
APEKLLRAML LQVLYSVRSE RQLMEQTHYN LLFRWFIGLA MDDVVWVPSV FSKNRERLIK
HDAVIDFFNE VLAIAQKKDW LSGEHFSVDG TLIKAWAGHK SFVRKDGDDQ DDNDGADFKG
EKRSNETHES KTDPDAKLYR KGKTASELRY MGHTLSDNRH GLVVSAMVTN ADGHAEREAA
KVMLNDARQV IEDLNVEVTV GADKGYDAHE FIQACLELKV TPHVAQNTSG RRSAVPDAIA
GTKGYAISQQ KRKLIEQGFG WAKTVGRMRQ VMVRGLKKVD QMFVLSMAAY NLVRMRSLGQ
IRPQLQ