Gene Rmet_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4220 
Symbol 
ID4041078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp804285 
End bp805181 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID637979643 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_586356 
Protein GI94313147 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCC CGATATCTAC AACGACCCCA CGGCCCGAGA CGCCGGACGA GATCCTTGAG 
CGGCTCAGCG CCAGGGCAAT CGTCCACCGG GACCGATCCG GTCCCACAGA GATGGTCTGG
CGCGAGATCG GTCGTGGCTC CCCCCTGGTA CTGATCCATG GCGGTCATGG AAACTGGATG
CACTGGGTGC GCAATATCGA GGCGCTGAGC CAGCAACACA CGCTATGGCT GCCTGACCTG
CCCGGTTTCG GTGAATCTGG CACGCTCGAC GGCGATCCTC ACGCGGATGA CCGGCTGGAT
CGGCTGGTCG ATACAGTGGC AGCCAGTCTG AGACAGCGGT TCGGCGCGTC GGATGGATTC
GCGCTGGCGG GCTTCTCTTT CGGTGGTGTA GTCGCGGCCC GCCTGGCGGC CGCGCTGCCG
AATGTCGAGA AGCTTGCGCT GCTGGGCTCC GCCGGGCATG GCGGTATGCG GCGCCAGCGA
CTCGATATGG TCAACTGGCG CACGGAGGAC CGCGAGCAGA TGCTGCAAGG CTTGAGGCAC
AACCTCAAGG CACTGATGCT TCACGATCCG TCCAGCATTG ATGCGCTGGC CATGGCGGTG
CACGAACGGG CTTGCATGGC CACGCGCTTT CGCAGCAAGT CCATTTCGCG CGGCGGCCCG
GTGCTCGGAC AGGCGCTCGA CAGCTATGGC GGAAAGACGC TGCTGATCTG GGGCGAGCAT
GACGTGACGG CTGACCCGTT GGAAGTGGCA CCGCGCATCG CGGGAAACTT GTCGACTCGG
CGATGGCACC TGGTTCCCGG CGGCGGGCAT TGGGTGCAAT ACGAACGAGC GGACGAAATC
AATCAGTTGC TGCTGCAGTG GTTCGCCAGT GGCGACGGCG GATTGCACGC CCGATGA
 
Protein sequence
MTSPISTTTP RPETPDEILE RLSARAIVHR DRSGPTEMVW REIGRGSPLV LIHGGHGNWM 
HWVRNIEALS QQHTLWLPDL PGFGESGTLD GDPHADDRLD RLVDTVAASL RQRFGASDGF
ALAGFSFGGV VAARLAAALP NVEKLALLGS AGHGGMRRQR LDMVNWRTED REQMLQGLRH
NLKALMLHDP SSIDALAMAV HERACMATRF RSKSISRGGP VLGQALDSYG GKTLLIWGEH
DVTADPLEVA PRIAGNLSTR RWHLVPGGGH WVQYERADEI NQLLLQWFAS GDGGLHAR