| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4207 |
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| Symbol | tnpA |
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| ID | 4041065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 791654 |
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| End bp | 792682 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979630 |
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| Product | transposase IS1088 |
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| Protein accession | YP_586343 |
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| Protein GI | 94313134 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.302839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAGA AAAATTACCA GCAGTTGAGT GAGACCGAAC GCCATGCGAT AGCCCTGGGG
CTGCAGCAAA AGCAAAGCCT CAGCGCCATA GCCAGGGCCC TGGGGCGTGA CAAGAGCACT
ATCAGCCGCG AGTGCAATCG CAATGCAGGC GGCAAGGGCT ACGCCTCCAA GTTCGCCCAG
CAGCGCAGTG ACAATCGCAA ACGCCAAGCC CGTCCCAGCC CCAAGCTGCA CCGCCAAGGG
CCCTTGTTCC CGCTGGTTTG CGACTACCTG CGCCACAAGT GGTCGCCCCA GCAAATCGCC
AACGAACTCC AGCGTCTTCA CCCACAGGAT CGCCGCTTGC AAGCCTCACA CGAAAGCATC
TACACCTGCA TCTACGCCCA GCCCCGGGGA GAGCTCAAGA AGGAGCTGGT GTCCTGCCTG
CGCATGGCCC ACGCCAAACG TTGGCCCCGC TCCAGGGGAA AGGATCGCCG CAAGGAGACG
CAAGACTTGC TGAGCATCCA TGTGCGAGCA CCCGAGATCG AGGATCGCCA GTTGCCCGGC
CACTGGGAGG GTGATCTGAT CAAAGGCAAG GCTAACGCCA GTGCGATTGG CACGCTGGTC
GAGCGCACCA CCCGTCTGGT GGTGCTGGTC AAGCTGCCAC ACCCCAACCC CGCCACAGCG
GCGCATGTAC TGCAAGCCTT CAGCGACAAG CTCAAGACAA TAGCCCAGCC GATGCGCCAG
ACCCTGACCT ACGACCGGGG CAGCGAGATG GCCGAGCACC GCCAGCTCAG CGAGAACACA
GGCATGAAGG TGTACTTCTG CGACCCCTAC AGTCCCTGGC AAAGGGGGAG CAACGAGAAC
ACCAATGGGC TCTTGCGCCA GTACTTCCCC AAGGGGACTG ATCTGAGTGG CTACAGCCAG
GAGCAGTTGG ACGCTGTGGC CGATGAGCTC AATGGACGGC CCAGGATGAC TCTGGGGTGG
CGCAAGCCCA TCGAGGTCTA TGCCGAGCAT TTGGCGCGGC TGGCCCAGCA GCCGGATTTA
GTGCATTGA
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| Protein sequence | MTKKNYQQLS ETERHAIALG LQQKQSLSAI ARALGRDKST ISRECNRNAG GKGYASKFAQ
QRSDNRKRQA RPSPKLHRQG PLFPLVCDYL RHKWSPQQIA NELQRLHPQD RRLQASHESI
YTCIYAQPRG ELKKELVSCL RMAHAKRWPR SRGKDRRKET QDLLSIHVRA PEIEDRQLPG
HWEGDLIKGK ANASAIGTLV ERTTRLVVLV KLPHPNPATA AHVLQAFSDK LKTIAQPMRQ
TLTYDRGSEM AEHRQLSENT GMKVYFCDPY SPWQRGSNEN TNGLLRQYFP KGTDLSGYSQ
EQLDAVADEL NGRPRMTLGW RKPIEVYAEH LARLAQQPDL VH
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