Gene Rmet_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4205 
Symbol 
ID4041063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp789469 
End bp790182 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID637979628 
Producthypothetical protein 
Protein accessionYP_586341 
Protein GI94313132 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR02798] 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.980622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCG TCGCTTATCG CAATATCCTG CGCGCCGAGT CGCGTGATGT CGAAGCGCTT 
GGCAAGTTCG GCGTGGCGAC GGTGCATGAG GCCCAGCGCC GAACCGGACT GATGAAGCCG
TATCTGCGGC CGATCCAGTC CGGTTCGGCA ATCTCGGGCT GTGCTGTCAC GGCGCTGATG
CATCCCGGCG ACAACTGGAT GATCCACGTG GCCGTGGAAA TGGTTCAGCC CGGCGATGTG
CTGGTGGTGG GCCTGGTGAG CGACTGCACA GACGGCGTGT TTGGCGATCT GCTGGCAACA
TCGCTGAAGG CGCGCGGCGC GCGCGGGCTG ATCATCGACT GCGGTGTGCG CGACGTGTCG
ACGCTGAACG TCATGGGCTT CCCGGTCTGG TCCCGTGCGA TTTCCGCGCA GGGCGCGGTC
AAGGAGACCG TGGGCGCGGT CAACGTACCG GTGGTCTGTG CCGGCGCGCT GGTACGCCCT
GGGGACGTGA TTGTCGCGGA CGATGACGGT GTGGTCGTCG TGGCGCGACC GCAAGCGGCG
GACATCGCCG CTAAGGCGGC CGAGCGGGAG GCGCTGGAAG CTGGCAAGCG CGAGAAGCTG
GCCTCCGGCG TGCTGGGCGT CGACATGTAC AACATGCGTC CGGGTCTGGC TGAGAAGGGT
CTGGTTTACC TCGATCAGAC TGTCGACTGG TACAGCGGCG CCAACGAAGC CTGA
 
Protein sequence
MRTVAYRNIL RAESRDVEAL GKFGVATVHE AQRRTGLMKP YLRPIQSGSA ISGCAVTALM 
HPGDNWMIHV AVEMVQPGDV LVVGLVSDCT DGVFGDLLAT SLKARGARGL IIDCGVRDVS
TLNVMGFPVW SRAISAQGAV KETVGAVNVP VVCAGALVRP GDVIVADDDG VVVVARPQAA
DIAAKAAERE ALEAGKREKL ASGVLGVDMY NMRPGLAEKG LVYLDQTVDW YSGANEA