| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4192 |
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| Symbol | plcN |
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| ID | 4041050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 775234 |
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| End bp | 777378 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979615 |
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| Product | phospholipase C |
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| Protein accession | YP_586328 |
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| Protein GI | 94313119 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.81751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCA GCAGCCGACG CAATTTCCTG AAGATGGCCG GCAGCAGTGC CGCCGCCACC
GCCGCGCTTG CCGCATTCCC GCCGGCCATC CGCCGCGCGC TGGCCATTCC GGCCAACAAC
GCTACCAAAT CGATCCGCGA CGTCGAATAC GTTGTGATCC TGACGCAGGA GAATCGCTCG
TTCGATCACT ACTTCGGCAC CATGAACGGC GTGCGCGGCT TCAGCGACCG CTTCCCGATT
CCACTGCCGG GCGGCCGCAA CGCATTCCAG CAGACCTACG CCAGCAACAA CATCAACCGC
GTGGTTCTGC CGTATCACCT GGACCAGACC GCCGGCAACG CCCAGCGCGT GAGCGGCACG
CCTCACAGCC AGCCCGACGC GCAGGCCGCG TGGGACCTCG GCCGCATGAG CGCGTGGCCC
ACCGCCAAGA AGACCCAGTC GATGGGCTAC TACACCGAGC AGGAACTGGG CTTCCAGTAC
GCGCTGGCCA ATGCCTTCAC GCTGTGCGAC GCCTACCACT GCGGCTTCCA CGGTGGCACC
AATACGAACC GGCTGTTCCA GTGGACCGGC ACCAATGATC CGTTTGGCAA GAACGGCGGC
CCGGTGATCG ACAACAGCGG CGACTCGCTC GACGCCACCG GCGTCAACTA CACCTGGACC
ACCTATCCGG AACGCCTGCA GGCCGCCGGC GTGACCTGGA AGGTCTACCA GAACATGCCG
GACAACTTCA CCGACAATCC GCTGGCTGGC TTCAAGCAGT ACCGCGCGGC CAACGCGGCG
CTGGGCAATG CCGCCAACGG CTCGCCGTAC ACGCCGTATA CGCCGGCCAA CGACACGGTG
AACCCGCTCT TCAAGGGCAT CGGCAACACC ATGCCCGATG GCGGCTTCCT GCAGGCACTG
CGCGATGACA TCGCCGCCGG CACGCTGCCG CAGGTATCGT GGATCGTCGC ACCTGCGACA
TACTCGGAAC ACCCGGGGCC GTCGAGCCCG GTGCAGGGCG CGTGGTACAC GCAGCAGTTG
CTCGACGCGC TGACGGCCAA CCCCGCGATC TGGAGCCGCA CGGTCCTGCT GATCAACTTC
GACGAGAACG ACGGCTTCTT CGACCACGTG CCGCCGCCGT GCGCCCCCGC GCTCGACGCT
ACGGGCAACC CCGTCGGCTA CACGACGATG GATGCATCGA CCGAGTACTA CAGCGTCGAC
AAGACGCCGT TTGGTCCCGG CCCGCGCGTG CCGATGTACG TTGTGTCGCC GTGGAGCCGA
GGTGGCTGGG TCAACTCGCA GGCCTTCGAT CACACCTCGA TCCTGCGTTT CATCGAGCAG
CGCTTCGGCG TGGCGGAAAC CAACATCAGT GCCTACCGCC GCGCGATCAT GGGCGATCTG
ATGTCGGCGT TCGACTTCAT CAACCCGAAC AGCAACACGG CCCTGGCCTT CACGCCGTTG
CAGAAGACGG ACGCCGACAC GCTGCGCGCC GCGCAGGATG CCAAGGCGCA GATTCCTGCG
CCGACGGTTG CCGCCCAGTC GATGCCCACC CAGAAGAACG GCACACGCCC GTCGCGCGCG
CTGCCCTACA CGCTGCATAC CAGCGGCTTC GAGGACCCGT CCACGAACAC GGTCTGGCTG
CGTTTCAAGA ACGACGGCAC CCAGGCCGCG GTATTCCACG TGTACGACCG CCTGCATCTG
GGCGATGTGC CGCGCCGCTA TGCGATCGAG GCGGGCAAGT CCTACGACGC GAAGCTCGAC
GTGAGCCGCG ACAGTGGCCG CTACGACCTC TGGGTGCTTG GCCCGAATGG CTATCACCGC
GCGTTCGTCG GCGATATCAG CGCGCAGAAG GCTGCCGGCG GCGGTGCCGC GCCCGAGATC
CGTGTGTGCT ACGACGAGGC CAACGCCCAG GTCTGGCTCA CGCTGATCAA CCGCGGCAGC
GCGACGTGCA CGTTCACGGT CAAGCCGAAC GCCTATCGGA ACGACGGCCC CTGGACGTTC
GAGGTCCCGG CCGGCAAGGA GGTCGACCAG CACTGGCCCG TGGGGTCGCA AGGCAACTGG
TACGACTTCA CGGTCACCAC ACAGCAGGGT GGTTTCATGC GCCGCTTCGC CGGCCGGCTG
GAGAACGGCA CGCATACGGT CTCCGACCCG GCCATGGGCG CCTGA
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| Protein sequence | MNSSSRRNFL KMAGSSAAAT AALAAFPPAI RRALAIPANN ATKSIRDVEY VVILTQENRS
FDHYFGTMNG VRGFSDRFPI PLPGGRNAFQ QTYASNNINR VVLPYHLDQT AGNAQRVSGT
PHSQPDAQAA WDLGRMSAWP TAKKTQSMGY YTEQELGFQY ALANAFTLCD AYHCGFHGGT
NTNRLFQWTG TNDPFGKNGG PVIDNSGDSL DATGVNYTWT TYPERLQAAG VTWKVYQNMP
DNFTDNPLAG FKQYRAANAA LGNAANGSPY TPYTPANDTV NPLFKGIGNT MPDGGFLQAL
RDDIAAGTLP QVSWIVAPAT YSEHPGPSSP VQGAWYTQQL LDALTANPAI WSRTVLLINF
DENDGFFDHV PPPCAPALDA TGNPVGYTTM DASTEYYSVD KTPFGPGPRV PMYVVSPWSR
GGWVNSQAFD HTSILRFIEQ RFGVAETNIS AYRRAIMGDL MSAFDFINPN SNTALAFTPL
QKTDADTLRA AQDAKAQIPA PTVAAQSMPT QKNGTRPSRA LPYTLHTSGF EDPSTNTVWL
RFKNDGTQAA VFHVYDRLHL GDVPRRYAIE AGKSYDAKLD VSRDSGRYDL WVLGPNGYHR
AFVGDISAQK AAGGGAAPEI RVCYDEANAQ VWLTLINRGS ATCTFTVKPN AYRNDGPWTF
EVPAGKEVDQ HWPVGSQGNW YDFTVTTQQG GFMRRFAGRL ENGTHTVSDP AMGA
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