| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4186 |
|---|
| Symbol | |
|---|
| ID | 4041044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 769461 |
|---|
| End bp | 770330 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979609 |
|---|
| Product | putative alpha/beta superfamily hydrolase |
|---|
| Protein accession | YP_586322 |
|---|
| Protein GI | 94313113 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0367374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCCC CAAAAGCGTC CCCCGCCCCC AATTCGTACC GGCGTTGGCT GGTTGGCGCC
GCAGGGCTGG CTGGTGTGGC GCTGCTGGCC GGCGTCGGAC GGCTAATACT GTTCCGCGCA
ATCGAACGGG AAGCGTTCGT TCCGGCCCCG GGCGGCACGG CAAGGCCAGA CGATTTCGGC
GTTGCATCGC GCCAGTTTGC ATTCGCAAGC GGCAACCGCA TGTTGCGTGG CTCATACGTC
GCGGCCTCGC CCGACGCGCC CGCACTGTCC GTATTTCATG GTGACGAGGA ATGCCTGGCC
GACTGGGCAC CCGTCCAGGC GCTATTGCAC GCCGCAGGCA TCAGTTCCTT CGTCTTCGAT
TACAGCGGCT ATGGCGCCAG CACGGGCCGG CCTTCCGTTC GCCACCTGCA CCAGGACGCC
CTGGCTGCCT ATGCCCAGTT CCGCGCAGTT ACACCAAAGG CGTCGCGGCA CTATGTCATG
GCGCACTCGC TCGGTAGCGG CGTATTGCTG GATGTTGTGG GCGATCTGGC GCCGGCACCC
GATGGCATGG TCATCGGCGC CGGATTCCGC TCTGCGCGTG CCGCCGCAGT CGTCACTGGC
CGGGTGCCGC GCTGGCTCGC CTGGATGTTG CCGGACCCAT GGAATAACAT CCGGCAAATC
CGGAATCTGA CCATGCCCAT CCTGCTGCTG CACAGCAAGC GGGATGAGAC GATCCCGTTC
CGGGATGCCG AATGCCTGGC CCGGGCCGCG CACGGGCCCC GGCGGCTGGA AGCCTTCGAG
GACCTTCCGC ATGACGCGGC GATCGAGCCC TCCTACATGA CCCGTTTCTG GGCGCCAGTG
ATCGCCTACC TGAAGAGCGG GAAGCTCTGA
|
|---|
| Protein sequence | MPPPKASPAP NSYRRWLVGA AGLAGVALLA GVGRLILFRA IEREAFVPAP GGTARPDDFG
VASRQFAFAS GNRMLRGSYV AASPDAPALS VFHGDEECLA DWAPVQALLH AAGISSFVFD
YSGYGASTGR PSVRHLHQDA LAAYAQFRAV TPKASRHYVM AHSLGSGVLL DVVGDLAPAP
DGMVIGAGFR SARAAAVVTG RVPRWLAWML PDPWNNIRQI RNLTMPILLL HSKRDETIPF
RDAECLARAA HGPRRLEAFE DLPHDAAIEP SYMTRFWAPV IAYLKSGKL
|
|---|
| |